QTL Accession ID | AQCH003 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | TIAG |
Trait Name | tiller angle |
Published Symbol | qTA-12 |
Trait Synonym(s) |
plant habit tiller type |
Trait Category | Anatomy |
Chromosome | 12 |
Comments |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 12 | 24,487,487-24,586,392 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 12 | 40.7-41.9 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQCH003 | 12 | 40.7 | 41.9 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RG463 | RFLP | Oryza sativa | qtl_marker |
To | G148 | RFLP | Oryza sativa | qtl_marker |
To | RG901 | RFLP | Oryza sativa | qtl_marker |
To | RG651 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000567) | Qian-Q et al., 2001 (IAGP) |
Plant Structure | (PO:0005001) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007073) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007049) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Qian-Q et al., 2001 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr12 | 24,487,487 | 24,586,392 | ~160K SNPs x 20 accessions (McNally 2... | 22 | Search for SNPs |
chr12 | 24,487,487 | 24,586,392 | '1536 chip' - 1311 SNPs x 395 rice ac... | 1 | Search for SNPs |
chr12 | 24,487,487 | 24,586,392 | B-Gross/J-Yulin SNP Pi-ta study in AA... | 0 | |
chr12 | 24,487,487 | 24,586,392 | Huang X, et al, Nat Genetics 2010 Nov... | 532 | Search for SNPs |
chr12 | 24,487,487 | 24,586,392 | RiceDiversity 44K SNP assay, 34 trait... | 532 | Search for SNPs |
chr12 | 24,487,487 | 24,586,392 | RiceDiversity 44K SNP assay, 34 trait... | 1 | Search for SNPs |