QTL Accession ID | AQCH001 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | TIAG |
Trait Name | tiller angle |
Published Symbol | qTA-9a |
Trait Synonym(s) |
plant habit tiller type |
Trait Category | Anatomy |
Chromosome | 9 |
Comments |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 20,481,606-21,189,283 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 9 | 132.9-138.9 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQCH001 | 9 | 132.9 | 138.9 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RG662 | RFLP | Oryza sativa | qtl_marker |
To | RM215 | SSR | Oryza sativa Indica Group | qtl_marker |
To | RM201 | SSR | Oryza sativa Indica Group | qtl_marker |
To | RZ404 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000567) | Qian-Q et al., 2001 (IAGP) |
Plant Structure | (PO:0005001) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007073) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007049) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Qian-Q et al., 2001 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr9 | 20,481,606 | 21,189,283 | ~160K SNPs x 20 accessions (McNally 2... | 144 | Search for SNPs |
chr9 | 20,481,606 | 21,189,283 | '1536 chip' - 1311 SNPs x 395 rice ac... | 3 | Search for SNPs |
chr9 | 20,481,606 | 21,189,283 | Huang X, et al, Nat Genetics 2010 Nov... | 1,438 | Search for SNPs |
chr9 | 20,481,606 | 21,189,283 | RiceDiversity 44K SNP assay, 34 trait... | 1,438 | Search for SNPs |
chr9 | 20,481,606 | 21,189,283 | RiceDiversity 44K SNP assay, 34 trait... | 47 | Search for SNPs |