QTL Accession ID | AQBC071 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | TIAG |
Trait Name | tiller angle |
Published Symbol | ta9 |
Trait Synonym(s) |
plant habit tiller type |
Trait Category | Anatomy |
Chromosome | 9 |
Comments | QTL was detected by genetic main effect using tiller angle data measured at the maximum tiller stage and heading stage in two locations (Hangzhou and Hainan). |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 18,513,777-19,427,299 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 9 | 71.3-74 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQBC071 | 9 | 71.3 | 74 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RZ228 | RFLP | Oryza sativa | qtl_marker |
To | RZ12 | RFLP | Oryza sativa | qtl_marker |
To | RZ422 | RFLP | Oryza sativa | qtl_marker |
To | RG667 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000567) | Yan-J et al., 1999 (IAGP) |
Plant Structure | (PO:0005001) | Yan-J et al., 1999 (SM) |
Plant Growth and Development Stage | (PO:0007073) | Yan-J et al., 1999 (SM) |
Growth Stage | (GRO:0007049) | Yan-J et al., 1999 (SM) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Yan-J et al., 1999 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr9 | 18,513,777 | 19,427,299 | ~160K SNPs x 20 accessions (McNally 2... | 492 | Search for SNPs |
chr9 | 18,513,777 | 19,427,299 | '1536 chip' - 1311 SNPs x 395 rice ac... | 6 | Search for SNPs |
chr9 | 18,513,777 | 19,427,299 | Huang X, et al, Nat Genetics 2010 Nov... | 1,842 | Search for SNPs |
chr9 | 18,513,777 | 19,427,299 | RiceDiversity 44K SNP assay, 34 trait... | 1,842 | Search for SNPs |
chr9 | 18,513,777 | 19,427,299 | RiceDiversity 44K SNP assay, 34 trait... | 101 | Search for SNPs |