QTL Accession ID | AQAJ003 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | MALERF |
Trait Name | male fertility restoration |
Published Symbol | qRf-10-2 |
Trait Synonym(s) | Male fertility restoration in F1 hybrids |
Trait Category | Sterility or fertility |
Chromosome | 10 |
Comments | Each of recombinant inbred lines was crossed to Xieqingzao A, and the resulting F1s were used for phenotyping of the spikelet fertility. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 10 | 18,014,265-19,209,997 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 10b | 7.3-17.9 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQAJ003 | 10 | 7.3 | 17.9 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RM258 | SSR | Oryza sativa Indica Group | qtl_marker |
To | RZ583 | RFLP | Oryza sativa | qtl_marker |
To | RM171 | SSR | Oryza sativa | qtl_marker |
To | RZ811 | RFLP | Oryza sativa | qtl_marker |
To | RG241 | RFLP | Oryza sativa | qtl_marker |
To | RZ861 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000308) | Xie-J-K et al., 2002 (IAGP) |
Plant Structure | (PO:0009066) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007016) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007151) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Xie-J-K et al., 2002 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr10 | 18,014,265 | 19,209,997 | ~160K SNPs x 20 accessions (McNally 2... | 690 | Search for SNPs |
chr10 | 18,014,265 | 19,209,997 | '1536 chip' - 1311 SNPs x 395 rice ac... | 8 | Search for SNPs |
chr10 | 18,014,265 | 19,209,997 | Huang X, et al, Nat Genetics 2010 Nov... | 1,371 | Search for SNPs |
chr10 | 18,014,265 | 19,209,997 | RiceDiversity 44K SNP assay, 34 trait... | 1,371 | Search for SNPs |
chr10 | 18,014,265 | 19,209,997 | RiceDiversity 44K SNP assay, 34 trait... | 130 | Search for SNPs |