QTL Accession ID | AQAI074 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | TGRWT |
Trait Name | 1000-grain weight |
Published Symbol | qGW8-1 |
Trait Synonym(s) | thousand grain weight |
Trait Category | Yield |
Chromosome | 8 |
Comments |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 18,994,607-19,052,586 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 8 | 42.2-42.8 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQAI074 | 8 | 42.2 | 42.8 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | R1394 | RFLP | Oryza sativa | qtl_marker |
To | G2132 | RFLP | Oryza sativa | qtl_marker |
To | RG978 | RFLP | Oryza sativa | qtl_marker |
To | R727 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000382) | Cui-H et al., 2003 (IAGP) |
Plant Structure | (PO:0009010) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007038) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007045) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Cui-H et al., 2003 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr8 | 18,994,607 | 19,052,586 | ~160K SNPs x 20 accessions (McNally 2... | 38 | Search for SNPs |
chr8 | 18,994,607 | 19,052,586 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr8 | 18,994,607 | 19,052,586 | Huang X, et al, Nat Genetics 2010 Nov... | 190 | Search for SNPs |
chr8 | 18,994,607 | 19,052,586 | RiceDiversity 44K SNP assay, 34 trait... | 190 | Search for SNPs |
chr8 | 18,994,607 | 19,052,586 | RiceDiversity 44K SNP assay, 34 trait... | 9 | Search for SNPs |