QTL Accession ID | AQAF038 | ||||||
---|---|---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||
Trait Symbol | BLRS | ||||||
Trait Name | blast disease resistance | ||||||
Published Symbol | rbr9a | ||||||
Trait Synonym(s) |
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Trait Category | Biotic stress | ||||||
Chromosome | 9 | ||||||
Comments | Lesion area (LA) was investigated to evaluate rice blast resistance. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 14,648,372-20,174,430 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 9b | 0-63.4 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQAF038 | 9 | 0 | 63.4 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | C472 | RFLP | Oryza sativa | qtl_marker |
To | R2638 | RFLP | Oryza sativa | qtl_marker |
To | RM257 | SSR | Oryza sativa Indica Group | qtl_marker |
To | CDO57 | RFLP | Avena sativa | qtl_marker |
To | RM242 | SSR | Oryza sativa Indica Group | qtl_marker |
To | RG570 | RFLP | Oryza sativa | qtl_marker |
To | RM201 | SSR | Oryza sativa Indica Group | qtl_marker |
To | RG667 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000074) | Chen-H et al., 2003 (IAGP) |
Plant Structure | (PO:0009025) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007130) | Gramene curators, 2007 (IC) |
(PO:0007134) | Gramene curators, 2007 (IC) | |
Growth Stage | (GRO:0007139) | Gramene curators, 2007 (IC) |
Environment | (EO:0007218) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Chen-H et al., 2003 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr9 | 14,648,372 | 20,174,430 | ~160K SNPs x 20 accessions (McNally 2... | 3,005 | Search for SNPs |
chr9 | 14,648,372 | 20,174,430 | '1536 chip' - 1311 SNPs x 395 rice ac... | 27 | Search for SNPs |
chr9 | 14,648,372 | 20,174,430 | Huang X, et al, Nat Genetics 2010 Nov... | 11,757 | Search for SNPs |
chr9 | 14,648,372 | 20,174,430 | RiceDiversity 44K SNP assay, 34 trait... | 11,757 | Search for SNPs |
chr9 | 14,648,372 | 20,174,430 | RiceDiversity 44K SNP assay, 34 trait... | 653 | Search for SNPs |