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Oryza sativa (japonica cultivar-group) protein "Q7XZF8" (Putative DNA binding protein) | Accession | Q7XZF8 | ||||||
|---|---|---|---|---|---|---|---|
| Species | Oryza sativa (japonica cultivar-group) [ GR_tax:013684 ] | ||||||
| Name | Putative DNA binding protein | ||||||
| Symbol | OSJNBb0033J23.9 | ||||||
| Synonyms (5) |
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| E.C. Numbers (0) | None | ||||||
| Gene Names (1) | bhlh41 (basic/helix-loop-helix 41) | ||||||
| Organelle | Not available | ||||||
| Best Hits To TIGR Rice Gene Models (0) | None [ Click here to generate a BLASTP query ] | ||||||
| IRGSP/RAP Genes (1) | Os03g0811400 | ||||||
| Source | TREMBL | ||||||
| GenBank Accessions (1) | AAP73859 | ||||||
| UniProt Accession (Sequence) | Q7XZF8 | ||||||
| Cultivar | Nipponbare ( GRIN , IRIS ) | ||||||
| Comment | Basic/helix-loop-helix (bHLH) transcription factors are known to play a role in the specification of tissue types in animals. The bHLH domain is approximately 60aa in size and consists of a basic region and a helix-loop-helix region. The helix-loop-helix region contains two amphipathic alpha helices. (Imported from Gene GR:0020179) |
Associated Ontologies (3) | Term Type | Term | Reference | Evidence |
|---|---|---|---|
| Molecular Function | transcription regulator activity (GO:0030528) | InterPro:IPR001092 | IC |
| Li-X et al., 2006 | IC | ||
| Jaiswal-P et al., 2006 | IC | ||
| Biological Process | GO:0045449 (GO:0045449) | InterPro:IPR001092 | IC |
| Li-X et al., 2006 | IC | ||
| Jaiswal-P et al., 2006 | IC | ||
| Cellular Component | nucleus (GO:0005634) | InterPro:IPR001092 | IC |
| Li-X et al., 2006 | IC | ||
| Jaiswal-P et al., 2006 | IC |
Keywords (0)
Similarity to Other Proteins (22) | Viridiplantae Green plants -Embryophytes (plants) -Magnoliophytes (flowering plants) -Monocots | Grasses | Rice | Maize | Sorghum | Wheat | Barley | Rye | Oat | Sugarcane -Dicots | Brassicaceae | Arabidopsis | Fabaceae (Legumes) | Solanaceae | Cucurbitaceae |
| Others : Fungi | Metazoa |
| 3D protein structures : BLink from NCBI |
Protein Features (4) | Pfam (Info) | PF00010; HLH | All Members of this Family | |
|---|---|---|---|
| Prosite (Info) | PS50888; HLH_2 | Sequence info. not available All Members of this Family |
|
| Physio-chemical features | Q7XZF8 | ||
| ProtoMap (Info) | Q7XZF8_ORYSA | ||
Database Cross-References (2) 
