![[Home Page]](/images/icons/gramene_logo180new.jpg "[Home Page]"){kind=icon}
Protein Home |
Advanced Search |
Search by Pfam or PROSITE |
Browse by GO Slim |
Documents |
Tutorial |
FAQ |
Help
Oryza sativa (indica cultivar-group) protein "Q652A1" (Auxin-responsive protein IAA26) | Accession | Q652A1 | ||||||
|---|---|---|---|---|---|---|---|
| Species | Oryza sativa (indica cultivar-group) [ GR_tax:013682 ] | ||||||
| Name | Auxin-responsive protein IAA26 | ||||||
| Symbol | IAA26 | ||||||
| Synonyms (5) |
|
||||||
| E.C. Numbers (0) | None | ||||||
| Gene Names (1) | iaa26 (Indoleacetic acid-induced protein 26) | ||||||
| Organelle | Not available | ||||||
| Best Hits To TIGR Rice Gene Models (0) | None [ Click here to generate a BLASTP query ] | ||||||
| IRGSP/RAP Genes (0) | None | ||||||
| Source | SWISSPROT | ||||||
| GenBank Accessions (1) | BAD46366 | ||||||
| UniProt Accession (Sequence) | Q652A1 | ||||||
| Cultivar | PUSA BASMATI 1 ( GRIN , IRIS ) | ||||||
| Comment | Aux/IAA genes encode short-lived transcriptional factors that act to repress the expression of early auxin response genes when auxin concentrations are low. Relative mRNA levels of iaa26 are highest in the flowers, mRNA also present in etioted shoots, green shoots,roots and callus. There is little difference in mRNA expression levels when coleoptile segments of 3-day-old etiolated seedlings are treated with 30 micro mols of 2,4-D in comparison to auxin depleted controls. Early auxin responsive gene. Aux/IAA genes encode short-lived transcriptional factors that act to repress the expression of early auxin response genes when auxin concentrations are low. (Imported from Gene GR:0020030) |
Associated Ontologies (7) | Term Type | Term | Reference | Evidence | |||
|---|---|---|---|---|---|---|
| Molecular Function | protein dimerization activity (GO:0046983) | Jaiswal-P et al., 2003 |
| |||
| Biological Process | response to auxin stimulus (GO:0009733) | Jain-M et al., 2006 | IC | |||
| regulation of translation (GO:0006417) | Jaiswal-P et al., 2003 |
| ||||
| GO:0045449 (GO:0045449) | Jaiswal-P et al., 2003 |
| ||||
| Cellular Component | nucleus (GO:0005634) | Jaiswal-P et al., 2003 |
| |||
| Plant Structure | coleoptile (PO:0020033) | Jain-M et al., 2006 | IC | |||
| Plant Growth and Development Stage | leaf production stage (PO:0007133) | Jain-M et al., 2006 | IC |
Keywords (0)
Similarity to Other Proteins (22) | Viridiplantae Green plants -Embryophytes (plants) -Magnoliophytes (flowering plants) -Monocots | Grasses | Rice | Maize | Sorghum | Wheat | Barley | Rye | Oat | Sugarcane -Dicots | Brassicaceae | Arabidopsis | Fabaceae (Legumes) | Solanaceae | Cucurbitaceae |
| Others : Fungi | Metazoa |
| 3D protein structures : BLink from NCBI |
Protein Features (4) | Pfam (Info) | PF02309; AUX_IAA | All Members of this Family | |
|---|---|---|---|
| Prosite (Info) | PS50962; IAA_ARF | Sequence info. not available All Members of this Family |
|
| Physio-chemical features | Q652A1 | ||
| ProtoMap (Info) | IAA26_ORYSA | ||
Database Cross-References (2) 
