Accession | Q58GE3 |
---|---|
Species | Oryza sativa (japonica cultivar-group) [ GR_tax:013684 ] |
Name | Undeveloped tapetum 1 |
Symbol | UDT1 |
Synonyms (0) | |
E.C. Numbers (0) | None |
Gene Names (1) | UDT1 (undeveloped Tapetum1) |
Organelle | Not available |
Best Hits To TIGR Rice Gene Models (0) | None [ Click here to generate a BLASTP query ] |
IRGSP/RAP Genes (0) | None |
Source | TREMBL |
GenBank Accessions (1) | AAX55226 |
UniProt Accession (Sequence) | Q58GE3 |
Cultivar | Dongjin ( GRIN , IRIS ) |
Comment | Rice Undeveloped Tapetum1 (UDT1) is predominantly expressed in the developing panicles, especially abundant in anthers. T-DNA or retrotransposon Tos17 insertions in the Udt1 gene caused male sterility. The anthers phenotype of knockout mutants were normal during the early premeiosis stage, but their tapeta failed to differentiate and became vacuolated during the meiotic stage. Furthermore, meiocytes did not develop to microspores, and middle layer degeneration was inhibited, therefore, the anther locules didn't contain any pollen grains. UDT is localized in the nucleus, and its sequence homology with other basic helix-loop-helix proteins suggests that UDT1 is a bHLH transcription factor. (Imported from Gene GR:0080007) |
Term Type | Term | Reference | Evidence |
---|---|---|---|
Molecular Function | transcription regulator activity (GO:0030528) | Jung-K-H et al., 2005 | ISS |
Biological Process | anther wall tapetum formation (GO:0048656) | Jung-K-H et al., 2005 | IMP |
anther wall tapetum development (GO:0048658) | Jung-K-H et al., 2005 | IMP | |
GO:0045449 (GO:0045449) | Jung-K-H et al., 2005 | ISS | |
Cellular Component | nucleus (GO:0005634) | Jung-K-H et al., 2005 | IDA |
Plant Structure | spikelet (PO:0009051) | Jung-K-H et al., 2005 | IEP |
PO:0006450 (PO:0006450) | Jung-K-H et al., 2005 | IMP | |
tetrad of microspores (PO:0000032) | Jung-K-H et al., 2005 | IMP | |
anther wall middle layer (PO:0004700) | Jung-K-H et al., 2005 | IMP | |
Plant Growth and Development Stage | D pollen mother cell meiosis stage (PO:0001009) | Jung-K-H et al., 2005 | IDA |
E tetrad stage (PO:0001029) | Jung-K-H et al., 2005 | IMP | |
Trait | pollen free (TO:0000245) | Jung-K-H et al., 2005 | IMP |
Viridiplantae Green plants -Embryophytes (plants) -Magnoliophytes (flowering plants) -Monocots | Grasses | Rice | Maize | Sorghum | Wheat | Barley | Rye | Oat | Sugarcane   -Dicots | Brassicaceae | Arabidopsis | Fabaceae (Legumes) | Solanaceae | Cucurbitaceae |
Others : Fungi | Metazoa |
3D protein structures : BLink from NCBI |
Pfam (Info) | PF00010; HLH | All Members of this Family | |
---|---|---|---|
Prosite (Info) | PS50888; HLH_2 | Sequence info. not available All Members of this Family |
|
Physio-chemical features | Q58GE3 | ||
ProtoMap (Info) | Q58GE3_ORYSA |