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Oryza sativa (japonica cultivar-group) protein "Q2R3F6" (Helix-loop-helix DNA-binding domain containing protein, expressed) | Accession | Q2R3F6 |
|---|---|
| Species | Oryza sativa (japonica cultivar-group) [ GR_tax:013684 ] |
| Name | Helix-loop-helix DNA-binding domain containing protein, expressed |
| Symbol | LOC_Os11g32100 |
| Synonyms (1) | basic helix loop helix 2, OsbHLH002, OsbHLH2 |
| E.C. Numbers (0) | None |
| Gene Names (1) | bhlh2 (basic/helix-loop-helix 2) |
| Organelle | Not available |
| Best Hits To TIGR Rice Gene Models (0) | None [ Click here to generate a BLASTP query ] |
| IRGSP/RAP Genes (1) | Os11g0523700 |
| Source | TREMBL |
| GenBank Accessions (1) | ABA93991 |
| UniProt Accession (Sequence) | Q2R3F6 |
| Cultivar | None. |
| Comment | Basic/helix-loop-helix (bHLH) transcription factors are known to play a role in the specification of tissue types ihn animals. The bHLH domain is approximately 60aa in size and consists of a basic region and a helix-loop-helix region. The helix-loop-helix region contains two amphipathic alpha helices. (Imported from Gene GR:0020142) |
Associated Ontologies (3) | Term Type | Term | Reference | Evidence |
|---|---|---|---|
| Molecular Function | transcription regulator activity (GO:0030528) | InterPro:IPR001092 | IC |
| Li-X et al., 2006 | IC | ||
| Jaiswal-P et al., 2006 | IC | ||
| Biological Process | GO:0045449 (GO:0045449) | InterPro:IPR001092 | IC |
| Li-X et al., 2006 | IC | ||
| Jaiswal-P et al., 2006 | IC | ||
| Cellular Component | nucleus (GO:0005634) | InterPro:IPR001092 | IC |
| Li-X et al., 2006 | IC | ||
| Jaiswal-P et al., 2006 | IC |
Keywords (1) Similarity to Other Proteins (22) | Viridiplantae Green plants -Embryophytes (plants) -Magnoliophytes (flowering plants) -Monocots | Grasses | Rice | Maize | Sorghum | Wheat | Barley | Rye | Oat | Sugarcane -Dicots | Brassicaceae | Arabidopsis | Fabaceae (Legumes) | Solanaceae | Cucurbitaceae |
| Others : Fungi | Metazoa |
| 3D protein structures : BLink from NCBI |
Protein Features (4) | Pfam (Info) | PF00010; HLH | All Members of this Family | |
|---|---|---|---|
| Prosite (Info) | PS50888; HLH_2 | Sequence info. not available All Members of this Family |
|
| Physio-chemical features | Q2R3F6 | ||
| ProtoMap (Info) | Q2R3F6_ORYSA | ||
Database Cross-References (2) 
