ID | 86431 | ||
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Name | GIF1 (GENE SYMBOL) | ||
Synonyms (2) |
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GRAMENE GENE | GR:0080062 | ||
Type | Gene | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | Rice GIF1 (GRAIN INCOMPLETE FILLING 1) gene that encodes a cell-wall invertase is required for carbon partitioning during early grain-filling. The cultivated GIF1 gene shows a restricted expression pattern during grain-filling compared to the wild rice allele, probably a result of accumulated mutations in the gene's regulatory sequence through domestication. Fine mapping with introgression lines revealed that the wild rice GIF1 is responsible for grain weight reduction. Ectopic expression of the cultivated GIF1 gene with the 35S or rice Waxy promoter resulted in smaller grains, whereas overexpression of GIF1 driven by its native promoter increased grain production. |
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Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | GR:0080062 |
Chromosome | 4 |
Has Phenotype | yes |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 20,250,215-20,255,106 bp | View Comparative Map | |||
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Term Type | Term Name | Term Accession | |
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Molecular Function | sucrose alpha-glucosidase activity | GO:0004575 | Search |
Cellular Component | cell wall | GO:0005618 | Search |
Biological Process | sucrose biosynthetic process | GO:0005986 | Search |
Biological Process | sucrose catabolic process, using invertase or sucrose synthase | GO:0010131 | Search |
Molecular Function | hydrolase activity | GO:0016787 | Search |
Cereal Plant Growth Stage | C-embryo stage | GRO:0007141 | Search |
Plant Structure | root tip | PO:0000025 | Search |
Plant Structure | carpel vascular system | PO:0005019 | Search |
Plant Structure | inflorescence internode | PO:0006326 | Search |
Plant Growth and Development Stage | whole plant fruit formation stage | PO:0007042 | Search |
Plant Structure | pericarp | PO:0009084 | Search |
Plant Structure | endosperm | PO:0009089 | Search |
Trait | amylopectin content | TO:0000097 | Search |
Trait | amylose content | TO:0000196 | Search |
Trait | glucose content | TO:0000300 | Search |
Trait | invertase activity trait | TO:0000311 | Search |
Trait | grain yield trait | TO:0000396 | Search |
Trait | grain weight | TO:0000590 | Search |
Trait | fructose content | TO:0006005 | Search |