ID | 86383 |
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Name | DSH1 (GENE SYMBOL) |
Synonyms (1) | Dihydrosphingosine C4 hydroxylase |
GRAMENE GENE | GR:0080040 |
Type | Gene |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | A cDNA for rice DSH1 was isolated from phloem-specific cDNA library. The DSH1 gene is a homolog of yeast SUR2 (UniProtKB:P38992) because it complements the molecular function of yeast sur2 null mutant. GUS assay showed expression of rice DSH1 in vascular bundles and apical meristem, in particular in the stigmas of flowers. RNAi results showed the severe reduction of fertility. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | GR:0080040 |
Chromosome | 6 |
Has Phenotype | yes |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 6,588,793-6,590,800 bp | View Comparative Map | |||
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Term Type | Term Name | Term Accession | |
---|---|---|---|
Molecular Function | sphingosine hydroxylase activity | GO:0000170 | Search |
Molecular Function | catalytic activity | GO:0003824 | Search |
Biological Process | sphingolipid metabolic process | GO:0006665 | Search |
Biological Process | metabolic process | GO:0008152 | Search |
Cellular Component | membrane | GO:0016020 | Search |
Cellular Component | cytoplasmic membrane-bounded vesicle | GO:0016023 | Search |
Biological Process | sphingolipid biosynthetic process | GO:0030148 | Search |
Cereal Plant Growth Stage | 1-4 leaf stage | GRO:0007142 | Search |
Plant Growth and Development Stage | developing seed stage | PO:0004506 | Search |
Plant Structure | vascular bundle | PO:0005020 | Search |
Plant Structure | portion of meristem tissue | PO:0009013 | Search |
Plant Structure | stigma | PO:0009073 | Search |
Plant Structure | lateral root | PO:0020121 | Search |
Plant Structure | apical meristem | PO:0020144 | Search |
Trait | fertility related trait | TO:0000420 | Search |