ID | 15841 | ||
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Name | UDT1 (GENE SYMBOL) | ||
Synonyms (2) |
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GRAMENE GENE | GR:0080007 | ||
Type | Gene | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | Rice Undeveloped Tapetum1 (UDT1) is predominantly expressed in the developing panicles, especially abundant in anthers. T-DNA or retrotransposon Tos17 insertions in the Udt1 gene caused male sterility. The anthers phenotype of knockout mutants were normal during the early premeiosis stage, but their tapeta failed to differentiate and became vacuolated during the meiotic stage. Furthermore, meiocytes did not develop to microspores, and middle layer degeneration was inhibited, therefore, the anther locules didn't contain any pollen grains. UDT is localized in the nucleus, and its sequence homology with other basic helix-loop-helix proteins suggests that UDT1 is a bHLH transcription factor. |
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Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | GR:0080007 |
Chromosome | 7 |
Has Phenotype | yes |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 21,813,241-21,815,056 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JRGP RFLP 2000 | BNL6.32 | 7 | 75.9-78.9 cM | View Comparative Map | |||
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Term Type | Term Name | Term Accession | |
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Cellular Component | nucleus | GO:0005634 | Search |
Molecular Function | transcription regulator activity | GO:0030528 | Search |
Biological Process | GO:0045449 | Search | |
Biological Process | anther wall tapetum formation | GO:0048656 | Search |
Biological Process | anther wall tapetum development | GO:0048658 | Search |
Cereal Plant Growth Stage | 02-seedling | GRO:0007047 | Search |
Cereal Plant Growth Stage | 5.1-early booting stage | GRO:0007149 | Search |
Cereal Plant Growth Stage | stamen stage ST5 | GRO:0007212 | Search |
Cereal Plant Growth Stage | 1.1-dry seed | GRO:0007216 | Search |
Plant Structure | tetrad of microspores | PO:0000032 | Search |
Plant Growth and Development Stage | D pollen mother cell meiosis stage | PO:0001009 | Search |
Plant Growth and Development Stage | E tetrad stage | PO:0001029 | Search |
Plant Structure | anther wall middle layer | PO:0004700 | Search |
Plant Structure | PO:0006450 | Search | |
Plant Structure | spikelet | PO:0009051 | Search |
Trait | pollen free | TO:0000245 | Search |
Environment | green house study | EO:0007248 | Search |
Environment | laboratory study | EO:0007255 | Search |