ID | 14062 | ||||||
---|---|---|---|---|---|---|---|
Name | PLA2 (GENE SYMBOL) | ||||||
Synonyms (5) |
|
||||||
GRAMENE GENE | GR:0061182 | ||||||
Type | Gene | ||||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||
Germplasm | |||||||
Description | The gene PLA2, also named LHD2, encodes a RNA binding protein which regulate the time interval between leaf initiation (called plastochron) in rice. It is the rice orthologue of maize TERMINAL EAR1(TE1). Expression of PLA2 is mainly observed in shoot apical meristem,and floral meristems, floral organs thrughout the reproduvtive stages. The mutants show several phenotypes including shortened plastochron, dwarfism, the reduction of leaf size/tiller number, acceleration of leaf maturation and ectopic shoot formation at the reprductive phase. Microarray analysis suggests PLA2 may regulate plastochron and other phenotypes through KNOX signaling and cytokinin/auxin metabolism in the meristem. |
||||||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | GR:0061182 |
Chromosome | 1 |
Has Phenotype | yes |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 39,522,595-39,526,184 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | JRGP RFLP 2000 | BNL6.32 | 1 | 157.1-158.2 cM | View Comparative Map | |||
|
Term Type | Term Name | Term Accession | |
---|---|---|---|
Molecular Function | nucleotide binding | GO:0000166 | Search |
Molecular Function | nucleic acid binding | GO:0003676 | Search |
Molecular Function | RNA binding | GO:0003723 | Search |
Biological Process | inflorescence development | GO:0010229 | Search |
Biological Process | leaf development | GO:0048366 | Search |
Biological Process | positive regulation of cell division | GO:0051781 | Search |
Cereal Plant Growth Stage | 04-stem elongation stage | GRO:0007048 | Search |
Cereal Plant Growth Stage | leaf development | GRO:0007138 | Search |
Cereal Plant Growth Stage | A-vegetative stage | GRO:0007139 | Search |
Cereal Plant Growth Stage | B-reproductive stage | GRO:0007140 | Search |
Cereal Plant Growth Stage | panicle stage PA1 | GRO:0007189 | Search |
Plant Structure | shoot apex | PO:0000037 | Search |
Plant Growth and Development Stage | sporophyte reproductive stage | PO:0007130 | Search |
Plant Growth and Development Stage | sporophyte vegetative stage | PO:0007134 | Search |
Plant Structure | vascular leaf | PO:0009025 | Search |
Plant Structure | flower bract | PO:0009034 | Search |
Plant Structure | stem | PO:0009047 | Search |
Plant Structure | radicle | PO:0020031 | Search |
Plant Structure | inflorescence axis | PO:0020122 | Search |
Plant Structure | stem internode | PO:0020142 | Search |
Plant Structure | shoot apical meristem | PO:0020148 | Search |
Plant Growth and Development Stage | inflorescence initiation stage | PO:0021004 | Search |
Trait | leaf length | TO:0000135 | Search |
Trait | tiller number | TO:0000346 | Search |
Trait | stem anatomy and morphology trait | TO:0000361 | Search |
Trait | vegetative growth time | TO:0000369 | Search |
Trait | leaf width | TO:0000370 | Search |
Trait | leaf shape | TO:0000492 | Search |
Trait | leaf development trait | TO:0000655 | Search |
Trait | mitotic cell cycle trait | TO:0000730 | Search |
Trait | plastochron | TO:0000735 | Search |
Trait | shoot meristem development | TO:0002638 | Search |
Environment | green house study | EO:0007248 | Search |
Environment | laboratory study | EO:0007255 | Search |
Environment | field study | EO:0007256 | Search |