ID | 14748 | ||
---|---|---|---|
Name | slr (GENE SYMBOL) | ||
Synonyms (2) |
|
||
GRAMENE GENE | GR:0060897 | ||
Type | Gene | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | The slender mutant results in a constitutive gibberellin (GA) response phenoype, including slender shoots, basal internodes elongate, reduced root number and root length, increased cell length at the apical portion of the second leaf sheath. The SLR1 gene is an intermediate of the GA signal transduction pathway. SLR1 maps to OsGAI in rice and has significant homology with height-regulating genes, such as RHT-1Da in wheat, D8 in maize (GR:0200107), and GAI and RGA in Arabidopsis. The GAI gene family is likely to encode transcriptional factors belonging to the GRAS gene superfamily. DNA sequence analysis revealed that the slr1-1 mutation is a single basepair deletion of the nuclear localization signal domain, resulting in a frameshift mutation that abolishes protein production. |
||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | GR:0060897 |
Chromosome | 3 |
Has Phenotype | yes |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 28,505,678-28,508,232 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | JRGP RFLP 2000 | BNL6.32 | 3 | 97.1-123.6 cM | View Comparative Map | |||
|
Term Type | Term Name | Term Accession | |
---|---|---|---|
Biological Process | regulation of gene expression, epigenetic | GO:0040029 | Search |
Cereal Plant Growth Stage | 02-seedling | GRO:0007047 | Search |
Plant Growth and Development Stage | leaf production stage | PO:0007133 | Search |
Plant Structure | root | PO:0009005 | Search |
Plant Structure | shoot system | PO:0009006 | Search |
Plant Structure | stem internode | PO:0020142 | Search |
Trait | root number | TO:0000084 | Search |
Trait | internode length | TO:0000145 | Search |
Trait | plant height | TO:0000207 | Search |
Trait | root length | TO:0000227 | Search |