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Oryza sativa Gene "SE1"
| ID | 11796 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | SE1 (GENE SYMBOL) | ||||||||||
| Synonyms (10) |
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| GENE SYMBOL | Fl1 | ||||||||||
| GRAMENE GENE | GR:0060860 | ||||||||||
| Type | Gene | ||||||||||
| Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||||||
| Germplasm | |||||||||||
| Description | Photoperiod sensitivity. Related to heading date and maturity in rice. Strong photoperiodic sensitivity is dominant over insensitivity. |
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| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | GR:0060860 |
| Chromosome | 6 |
| Has Phenotype | yes |
Database Cross-References (0)
Sequences (0)
Map Positions (3)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 9,335,360-9,337,644 bp | View Comparative Map | |||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Hokkaido Morphological 2000 | BNL6.32 | 6 | 67-67 cM | View Comparative Map | |||
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| JRGP RFLP 2000 | BNL6.32 | 6 | 54.3-54.9 cM | View Comparative Map | ||||
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Associations (3)
| Species | Type | Name | Assoc. Type |
|---|---|---|---|
| Oryza sativa | QTL | CQAK1 | ISS |
| Oryza sativa | QTL | CQAK13 | ISS |
| Oryza sativa | QTL | CQAK3 | ISS |
Associated Ontologies (23)
| Term Type | Term Name | Term Accession | |
|---|---|---|---|
| Molecular Function | DNA binding | GO:0003677 | Search |
| Molecular Function | sequence-specific DNA binding transcription factor activity | GO:0003700 | Search |
| Cellular Component | nucleus | GO:0005634 | Search |
| Biological Process | biological_process | GO:0008150 | Search |
| Molecular Function | zinc ion binding | GO:0008270 | Search |
| Biological Process | photoperiodism | GO:0009648 | Search |
| Biological Process | inflorescence development | GO:0010229 | Search |
| Biological Process | long-day photoperiodism | GO:0048571 | Search |
| Biological Process | short-day photoperiodism | GO:0048572 | Search |
| Cereal Plant Growth Stage | 06-heading stage | GRO:0007044 | Search |
| Cereal Plant Growth Stage | 09-mature grain stage | GRO:0007045 | Search |
| Cereal Plant Growth Stage | 04-stem elongation stage | GRO:0007048 | Search |
| Plant Structure | PO:0006318 | Search | |
| Plant Growth and Development Stage | whole plant fruit ripening complete stage | PO:0007038 | Search |
| Plant Growth and Development Stage | inflorescence emergence stage | PO:0007041 | Search |
| Plant Growth and Development Stage | stem elongation stage | PO:0007089 | Search |
| Plant Structure | seed | PO:0009010 | Search |
| Plant Structure | portion of meristem tissue | PO:0009013 | Search |
| Plant Structure | vascular leaf | PO:0009025 | Search |
| Plant Structure | inflorescence | PO:0009049 | Search |
| Trait | days to heading | TO:0000137 | Search |
| Trait | photoperiod sensitivity | TO:0000229 | Search |
| Trait | days to maturity | TO:0000469 | Search |
Images (0)
