Oryza sativa Japonica Group SSR "RM17601"

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Oryza sativa Japonica Group SSR "RM17601"

ID	74885
Name	RM17601
Synonyms (1)	AUT17601
Type	SSR
Species	Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ]
Germplasm
Description
Tags ()	None

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Details

Marker Created:
Marker Updated:
Internal Marker Accession:	RM17601
Repeat Motif	(CCG)8
Anneal Temperature
Expected PCR Product Size	241
Sequence Source
Linkage Group
Remarks

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Database Cross-References (1)

Gramene Literature	"The map-based sequence of the rice genome", Nature, 2005, vol. 436, pp. 793-800

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Sequences (2)

Repeat motif: (CCG)8 highlighted on FASTA sequence in red (if found).

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Related Sequences (2)

>AUT17601_forward Oryza sativa Japonica Group Primer [24 bp]. Associated to 'RM17601' via primer_forward

 
          cctatggccttctcctctttctcg

>AUT17601_reverse Oryza sativa Japonica Group Primer [21 bp]. Associated to 'RM17601' via primer_reverse

 
          atggagatggcgagtgtgtgg

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Map Positions (1)

Oryza sativa Japonica Group (1)

Map Type

Map Set

Name

Map

Position

Ext. Links

Sequence

Gramene Annotated Nipponbare Sequence 2009

BNL6.32

33,597,052-33,597,293 bp

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Associations (2)

Species	Type	Name	Assoc. Type
Oryza sativa Japonica Group	Primer	AUT17601_forward	primer_forward
Oryza sativa Japonica Group	Primer	AUT17601_reverse	primer_reverse

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Associated Ontologies (0)

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Images (0)