ID | 4913 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Name | CDO507 (GRAINGENES PROBE) | ||||||||||||||||
Synonyms (16) |
|
||||||||||||||||
MAIZEGDB PROBE | p-cdo507 | ||||||||||||||||
Type | RFLP | ||||||||||||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||||||||||||
Germplasm | |||||||||||||||||
Description | |||||||||||||||||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | CDO507 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0 |
Vector Excision Enzyme | EcoRI/XhoI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0121 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell Diploid 1995 | BNL6.32 | G | 92-92 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Composite 2004 | BNL6.32 | 6B | 99-99 cM | View Comparative Map | |||
|
||||||||
BNL6.32 | 6B | 124-124 cM | View Comparative Map | |||||
|
||||||||
Cornell Synthetic/Opata 1995 | BNL6.32 | 6B | 9-9 cM | View Comparative Map | ||||
|
||||||||
QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 6B | 9-9 cM | View Comparative Map | |||
|
||||||||
Wheat composite QTL 2004 | BNL6.32 | 6B | 99-99 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 6B | 124-124 cM | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 1994 | BNL6.32 | 2 | 139.4-139.4 cM | View Comparative Map | |||
|
||||||||
BNL6.32 | 5 | 57.9-57.9 cM | View Comparative Map | |||||
|
||||||||
Cornell RFLP 2001 | BNL6.32 | 2 | 122.1-122.1 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 5 | 51-51 cM | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Huazhong RFLP 1997 | BNL6.32 | 2 | 130-130 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Paterson 2003 | BNL6.32 | C | 109.3-109.3 cM | View Comparative Map | |||
|
||||||||
BNL6.32 | F | 54.7-54.7 cM | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell Wilson 1999 | BNL6.32 | 4 | 92.9-92.9 cM | View Comparative Map | |||
|
||||||||
IBM 2002 | BNL6.32 | 5 | 460.6-460.6 cM | View Comparative Map | ||||
|
||||||||
UMC 1998 | BNL6.32 | 1 | 18.3-18.3 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 5 | 131-131 cM | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 29,817,470-29,817,514 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 2 | 29,817,470-29,817,704 bp | View Comparative Map | |||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Triticum aestivum | QTL | AQHA001 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 1.01 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 4.06 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 5.06 | bin_marker |
Avena sativa | Probed Site | cdo507a(ant) | maizegdb_to_gramene |
Avena sativa | EST | AA231844 | related_sequence |
Avena sativa | EST | AI978371 | related_sequence |
Avena sativa | EST | AI978372 | related_sequence |
Avena sativa | EST | BE439264 | related_sequence |
Avena sativa | EST | BE439279 | related_sequence |
Avena sativa | EST | BE439290 | related_sequence |
Avena sativa | EST | AA231704 | related_sequence |
CDO507 BROWS Autorad: Survey blot of the probe CDO507 for the comparative barley/rice/oat/wheat/sugarcane project | |
CDO507 SL Autorad: Survey blot of the probe CDO507 for the BS125/2/BS125/WLO2 population |