ID | 4908 | ||||||
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Name | CDO59 (GRAINGENES PROBE) | ||||||
Synonyms (6) |
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MAIZEGDB PROBE | p-cdo59 | ||||||
Type | RFLP | ||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||
Germplasm | |||||||
Description | |||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO59 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.8 |
Vector Excision Enzyme | EcoRI/XhoI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | G | 96.4-96.4 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 7 | 59.6-59.6 cM | View Comparative Map | |||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 7 | 97.6-97.6 cM | View Comparative Map | |||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 7 | 18.8-18.8 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 7 | 60.2-60.2 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 7 | 60.2-60.2 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 7 | 59.6-59.6 cM | View Comparative Map | ||||
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Cornell V20A/glab QTL 2004 | BNL6.32 | 7 | 76.1-76.1 cM | View Comparative Map | ||||
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IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 7 | 112.5-112.5 cM | View Comparative Map | ||||
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Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 7 | 113-113 cM | View Comparative Map | ||||
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Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 7 | 56.7-56.7 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 7 | 94.7-94.7 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 7 | 51.4-51.4 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Klein 2004 | BNL6.32 | LG-02 | 153.8-157.5 cM | View Comparative Map | |||
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Mace 2009 | BNL6.32 | 2 | 165.3-165.3 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 2 | 118.2-118.2 cM | View Comparative Map | |||
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BNL6.32 | 4 | 76.1-76.1 cM | View Comparative Map | |||||
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BNL6.32 | 7 | 113.8-113.8 cM | View Comparative Map | |||||
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UMC 1998 | BNL6.32 | 7 | 91.5-91.5 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 20,732,340-20,732,663 bp | View Comparative Map | |||
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BNL6.32 | Chr. 7 | 20,732,830-20,733,138 bp | View Comparative Map | |||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQA024 | qtl_marker |
Oryza sativa | QTL | AQA026 | qtl_marker |
Oryza sativa | QTL | AQA047 | qtl_marker |
Oryza sativa | QTL | AQBC098 | qtl_marker |
Oryza sativa | QTL | AQBC099 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 2.06 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 4.05 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 7.03 | bin_marker |
Oryza sativa | QTL | CQZ13 | qtl_marker |
Oryza sativa | QTL | CQAI29 | qtl_marker |
Oryza sativa | QTL | DQE27 | qtl_marker |
Oryza sativa | QTL | CQAI50 | qtl_marker |
Oryza sativa | QTL | CQK8 | qtl_marker |
Oryza sativa | QTL | CQK7 | qtl_marker |
Avena sativa | Probed Site | cdo59a(gos2) | maizegdb_to_gramene |
Avena sativa | Probed Site | cdo59b(gos2) | maizegdb_to_gramene |
Avena sativa | Probed Site | cdo59c(gos2) | maizegdb_to_gramene |
Avena sativa | EST | AA231859 | related_sequence |
Avena sativa | EST | AA231709 | related_sequence |
CDO59 SL Autorad: Survey blot of the probe CDO59 for the BS125/2/BS125/WLO2 population |