ID | 4868 | ||||||
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Name | CDO459 (GRAINGENES PROBE) | ||||||
Synonyms (6) |
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Type | RFLP | ||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||
Germplasm | |||||||
Description | |||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO459 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.3 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0114 |
Overgo2 |
GCAGAATCGGAGGTCCTCACTAACTCATGCATACATGTGTCAACCCAACCTTTTTCACTTCTGCGGAAAAGANGGTTAAG
TTGGCCGCCTGCTAACTTTTCTAAAGGAATCCAGAACCTTCATTTCCTACTGGAGGTGATATGAGCTTCTATTGTCGCCT
GCCACGCCAATGGTCCCTCGGTGTGGCATGCATGCTTACGGTCTGGGTGCTCTTGCTTTCCC
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | F | 59.8-59.8 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 12 | 77.1-77.1 cM | View Comparative Map | |||
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CNHZAU 58S/1514 F2 QTL 1999 | BNL6.32 | 12 | 3.5-3.5 cM | View Comparative Map | ||||
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CNHZAU Pei/8902 QTL 1999 | BNL6.32 | 12 | 71.9-71.9 cM | View Comparative Map | ||||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 12 | 91.4-91.4 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 12 | 75.4-75.4 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 12 | 93.9-93.9 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | BNL 1996 | BNL6.32 | 3 | 76.6-76.6 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Klein 2004 | BNL6.32 | LG-08 | 99.2-99.2 cM | View Comparative Map | |||
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Mace 2009 | BNL6.32 | 8 | 76.1-76.1 cM | View Comparative Map | ||||
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Paterson 2003 | BNL6.32 | E | 38.5-38.5 cM | View Comparative Map | ||||
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Physical | TAMU FPC 2004 | BNL6.32 | ctg511 | 23-41 bands | View Comparative Map | |||
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QTL | UGA BTx623/IS3620C RL SSR RFLP QTL 2006 | BNL6.32 | 8 | 81.9-81.9 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 12 | 23,373,460-23,373,674 bp | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQBS021 | qtl_marker |
Oryza sativa | QTL | AQBS028 | qtl_marker |
Oryza sativa | QTL | AQBS040 | qtl_marker |
Oryza sativa | QTL | AQBS061 | qtl_marker |
Oryza sativa | QTL | AQBS068 | qtl_marker |
Oryza sativa | QTL | AQBW001 | qtl_marker |
Oryza sativa | QTL | AQBW002 | qtl_marker |
Oryza sativa | QTL | AQCO132 | qtl_marker |
Oryza sativa | QTL | AQCO134 | qtl_marker |
Sorghum bicolor | QTL | AQGN046 | qtl_marker |
Sorghum bicolor | QTL | AQGN047 | qtl_marker |
Sorghum bicolor | QTL | AQGN048 | qtl_marker |
Sorghum bicolor | QTL | AQHL015 | qtl_marker |
Sorghum bicolor | QTL | AQHL025 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 3.04 | bin_marker |
Avena sativa | Probed Site | cdo459 | maizegdb_to_gramene |
Avena sativa | EST | AA231917 | related_sequence |
CDO459 SL Autorad: Survey blot of the probe CDO459 for the BS125/2/BS125/WLO2 population |