ID | 4806 |
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Name | RZ397 (GRAINGENES PROBE) |
Synonyms (0) | None. |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | Plasmids from the Paterson lab |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ397 |
DNA Treatment | |
Source Type | |
Source Tissue | |
Source Treatment | |
Vector | |
Vector Antibiotic Resistance | |
Fragment Size | |
Vector Excision Enzyme | |
Vector Primers | |
Overgo1 | |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 12 | 5,758,288-5,758,602 bp | View Comparative Map | |||
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BNL6.32 | Chr. 12 | 5,758,663-5,758,850 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Physical | Curated FPC Chr OG_BB Feb 2006 | BNL6.32 | 3 | 15,756,251-15,756,251 bp | View Comparative Map | |||
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BNL6.32 | 12 | 4,846,251-4,846,251 bp | View Comparative Map | |||||
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Curated FPC OG_BB Feb 2006 | BNL6.32 | ctg153 | 1,350-1,350 bands | View Comparative Map | ||||
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BNL6.32 | ctg39 | 985-985 bands | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Physical | Curated FPC Chr OR_CB Feb 2006 | BNL6.32 | 12 | 5,956,021-5,956,021 bp | View Comparative Map | |||
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Curated FPC OR_CB Feb 2006 | BNL6.32 | ctg268 | 1,191-1,191 bands | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | IGCN 1998 | BNL6.32 | 12 | 100.7-100.7 cM | View Comparative Map | |||
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TTU IRIR 2000 | BNL6.32 | 12A | 23-23 cM | View Comparative Map | ||||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 12 | 36.9-36.9 cM | View Comparative Map | |||
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CNHZAU Pei/8902 QTL 1999 | BNL6.32 | 12 | 73.3-73.3 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 12 | 50-50 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 12 | 25-25 cM | View Comparative Map | ||||
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Cornell V20A/glab QTL 2004 | BNL6.32 | 12 | 37.5-37.5 cM | View Comparative Map | ||||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 12 | 18.2-18.2 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 12 | 63.9-63.9 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 12 | 100.7-100.7 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 12 | 16.2-16.2 cM | View Comparative Map | ||||
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IRRI Mor/CO39 QTL 1994 | BNL6.32 | 12 | 58.8-58.8 cM | View Comparative Map | ||||
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TAMU Lem/Teq RI QTL 1995 | BNL6.32 | 12 | 139-139 cM | View Comparative Map | ||||
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TTU IR58821/IR52561 QTL 2002 | BNL6.32 | 12a | 23-23 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 12 | 54.3-54.3 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 12 | 28-28 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Physical | Curated FPC Chr OR_BB Feb 2006 | BNL6.32 | UNKNOWN | 3,802,921-3,802,921 bp | View Comparative Map | |||
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Curated FPC OR_BB Feb 2006 | BNL6.32 | ctg240 | 194-194 bands | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Physical | FPC Chr OC__B Dec 2006 | BNL6.32 | 12 | 8,388,601-8,388,601 bp | View Comparative Map | |||
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BNL6.32 | 12 | 11,013,421-11,013,421 bp | View Comparative Map | |||||
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FPC OC__B Dec 2006 | BNL6.32 | ctg964 | 487-487 bands | View Comparative Map | ||||
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BNL6.32 | ctg969 | 400-400 bands | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell Diploid 1995 | BNL6.32 | D | 33.5-33.5 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 12 | 24.4-24.4 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 12 | 42-42 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Huazhong RFLP 1997 | BNL6.32 | 12 | 36.3-36.3 cM | View Comparative Map | |||
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RZ397 SL Autorad: Survey blot of the probe RZ397 for the BS125/2/BS125/WLO2 population |