ID | 15098 | ||
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Name | RG182 | ||
Synonyms (2) |
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Type | RFLP | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | |||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG182 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pUC8 |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 3.4 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 742 |
CCATCAAGATACCTGTTGAGGCTAATATCCTGGCTGATACCTCTCAATCCTATAAACTGCACCATGAATAAAGTTTCATG
GATTTAAATTGCTATCTTTGCATGAGACCAACTGGAGTGGATAACTCATCGTGCAAATGAATTAAAGAGTTTGGCTAGAA
CACATCATGGGGGTATATATATATATNNNTATATATATATATATATATATATATATATATATATATATATATATATATGG
GTCGGGNGCTATCTACCACAATAACAAAGGTGGCATTCAGGTACAAAGAGTTCNATAAGTGNATAACAAGCCAAAATTAG
CATACCATTACAGTGTGGTCCAGTGCTGGGATTTAAATTGCNNCGGGNNGNCCCANNNCGNTTGGGG
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 6,132,767-6,133,121 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JRGP RFLP 2000 | BNL6.32 | 5 | 41.4-41.4 cM | View Comparative Map | |||
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QTL | CNRRI Tes/CB QTL 1997 | BNL6.32 | 5 | 57.7-57.7 cM | View Comparative Map | |||
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CNRRI Tes/CB QTL 1998 | BNL6.32 | 5a | 0-0 cM | View Comparative Map | ||||
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CNRRI Wai/CB QTL 1996 | BNL6.32 | 5 | 32.3-32.3 cM | View Comparative Map | ||||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 5 | 71.1-71.1 cM | View Comparative Map | ||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 5 | 23.7-23.7 cM | View Comparative Map | ||||
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IGCAS Jas85/Lem F2 QTL 2000 | BNL6.32 | 5 | 85-85 cM | View Comparative Map | ||||
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IRRI Mor/CO39 QTL 1994 | BNL6.32 | 5 | 23.9-23.9 cM | View Comparative Map | ||||
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IRRI Pal/IR42 F2 QTL 1995 | BNL6.32 | 5 | 110.5-110.5 cM | View Comparative Map | ||||
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JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 5 | 41.4-41.4 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 5 | 37.7-37.7 cM | View Comparative Map | ||||
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TAMU Lem/Teq RI QTL 1995 | BNL6.32 | 5 | 65-65 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 5 | 26-26 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN sativa/eichingeri RFLP | BNL6.32 | 5 | 41-41 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 5 | 47.3-47.3 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 5 | 46.8-46.8 cM | View Comparative Map | ||||
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RG182 78-79 Autorad: Survey blot of the probe RG182 for the 78-79 population |