ID | 12201 |
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Name | RG662 |
Synonyms (0) | None. |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG662 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pGEM4Z |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 2.3 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 805 |
ATGCCTGCAGTTCTTGTGGCACAGTGCTCTTGAAAATATGGTATCGTGAACACTTGTTATCAATTTTGATATGACTTTGT
TACGTAGGAAAAGTTTGCTTGTTTTTGTCTCCTCTGATGAGTCATTTACTACCCGGAGTGGTCAGATCATTGGTGCCTTT
TGTGACCTAAACCCAGTAGACTTTCTGGATTGAGAAAGTTGGGAACTATAGCAAATTGGCAAACCATTCCAGGACGCAAG
AACAGATCGGTCAATTTTACTGTCCCGTTTCCAGAACCTTATAATTTGGCGAGCTAACCTCTGCATGATCCTATCTTTTG
ATCCTTTCTCTTCGGCTTGCACTGCCTTGTACTCAACAAATATCTCACATAAGAGCTCCTGTCCAAGTCTGAACAAGAGA
GCTCTCCAAGTCCATTTACCANGGNTAATGCTAGGNCAGCTCCCAGCCAATGCCGGCGCGGCACGCCGTGATNGACGAGG
GACACACGGGTCAAACTAGGGGGGCCACTTACTGGGGGGTCATGGAGGTGGAAAGGANACGACAGTTCAGTGTGGAAGTC
GAAGTGTGTNAGNAGGTNTTCNGNAACATCCNNGGGATTNAGCATNGGGANNACNGGCAAGTTGGGGCAAAGTCAAGGCA
NAGGGGGTNCGNCCANAGGTNCACCGNCCCCAGGGGAACCCACGGACCNNCCCGGGTNCCTNG
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 20,481,606-20,482,133 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN 1998 | BNL6.32 | 9 | 132.9-132.9 cM | View Comparative Map | |||
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KRGRP 1998 | BNL6.32 | 9 | 90.8-90.8 cM | View Comparative Map | ||||
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QTL | CNRRI Tes/CB QTL 1997 | BNL6.32 | 9 | 68.5-68.5 cM | View Comparative Map | |||
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CNRRI Wai/CB QTL 1996 | BNL6.32 | 9 | 18.3-18.3 cM | View Comparative Map | ||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 9b | 8.3-8.3 cM | View Comparative Map | ||||
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Cornell 9024/LH422 RI QTL 1996 | BNL6.32 | 9 | 37.1-37.1 cM | View Comparative Map | ||||
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IGCAS Jas85/Lem F2 QTL 2000 | BNL6.32 | 9 | 0-0 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 9 | 132.9-132.9 cM | View Comparative Map | ||||
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IGCN ZYQ8/JX17 RI QTL 2001 | BNL6.32 | 9 | 0-99.6 cM | View Comparative Map | ||||
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IRRI Mor/CO39 QTL 1994 | BNL6.32 | 9 | 45-45 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 9 | 90.8-90.8 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 9 | 81.4-81.4 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | IGCN sativa/eichingeri RFLP | BNL6.32 | 9 | 109.1-109.1 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Huazhong RFLP 1997 | BNL6.32 | 9 | 98.7-98.7 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAK021 | qtl_marker |
Oryza sativa | QTL | AQBK037 | qtl_marker |
Oryza sativa | QTL | AQBK052 | qtl_marker |
Oryza sativa | QTL | AQBK054 | qtl_marker |
Oryza sativa | QTL | AQCH001 | qtl_marker |
Oryza sativa | QTL | AQHP063 | qtl_marker |
Oryza sativa | QTL | AQHP075 | qtl_marker |
Oryza sativa | QTL | AQHP085 | qtl_marker |
Oryza sativa | QTL | CQAN7 | qtl_marker |
Oryza sativa | QTL | CQAS105 | qtl_marker |
Oryza sativa | QTL | CQAS106 | qtl_marker |
Oryza sativa | QTL | CQAS107 | qtl_marker |
Oryza sativa | QTL | CQAS108 | qtl_marker |
Oryza sativa | QTL | CQAS109 | qtl_marker |
Oryza sativa | QTL | CQAS112 | qtl_marker |
Oryza sativa | QTL | CQAS113 | qtl_marker |
Oryza sativa | QTL | CQAS114 | qtl_marker |
Oryza sativa | QTL | CQAS115 | qtl_marker |
Oryza sativa | QTL | CQAS116 | qtl_marker |
Oryza sativa | QTL | CQAS117 | qtl_marker |
Oryza sativa | QTL | CQAW28 | qtl_marker |
Oryza sativa Indica Group | GSS | AQ074209 | related_sequence |