ID | 12115 |
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Name | RM31 |
Synonyms (1) | GA257 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM31 |
Repeat Motif | (GA)15 |
Anneal Temperature | 55 |
Expected PCR Product Size | 140 |
Sequence Source | AF343847 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
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Gramene Diversity Rice Marker | 56 |
Gramene Diversity Rice Marker | 1258 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 28,610,712-28,610,858 bp | View Comparative Map | |||
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BNL6.32 | Chr. 5 | 28,610,764-28,610,866 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN 1998 | BNL6.32 | 5 | 134.9-134.9 cM | View Comparative Map | |||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 5 | 153.8-153.8 cM | View Comparative Map | |||
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CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 5 | 131.8-131.8 cM | View Comparative Map | ||||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 5 | 123-123 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 5 | 132-132 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 5 | 134.9-134.9 cM | View Comparative Map | ||||
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INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 5 | 181-181 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 5 | 102.6-102.6 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 5 | 165.6-165.6 cM | View Comparative Map | ||||
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JHPRC Rei/Yamd QTL 2002 | BNL6.32 | 5 | 105.4-105.4 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 5 | 75-75 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 5 | 100.6-100.6 cM | View Comparative Map | ||||
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