ID | 12059 |
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Name | RG227 |
Synonyms (1) | RG227(K) |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG227 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pUC8 |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.8 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 751 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 7,768,761-7,769,199 bp | View Comparative Map | |||
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BNL6.32 | Chr. 3 | 7,768,963-7,769,464 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN 1998 | BNL6.32 | 3 | 56.2-56.2 cM | View Comparative Map | |||
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QTL | AGEBC KDM105/CT999 RI QTL 2000 | BNL6.32 | 3b | 27.5-27.5 cM | View Comparative Map | |||
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CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 3 | 235.4-235.4 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 3 | 235.4-235.4 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 F2 QTL 1995 | BNL6.32 | 3 | 59-59 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 3 | 56.2-56.2 cM | View Comparative Map | ||||
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IRRI Mor/CO39 QTL 1994 | BNL6.32 | 3 | 14.5-14.5 cM | View Comparative Map | ||||
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IRRI Pal/IR42 F2 QTL 1995 | BNL6.32 | 3a | 98.8-98.8 cM | View Comparative Map | ||||
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Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 3 | 168.4-168.4 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 3 | 19.4-19.4 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 3 | 50.75-50.75 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQDI004 | qtl_marker |
Oryza sativa | QTL | AQDK007 | qtl_marker |
Oryza sativa | QTL | AQEL012 | qtl_marker |
Oryza sativa | QTL | CQAR7 | qtl_marker |
Oryza sativa | QTL | CQAR8 | qtl_marker |
Oryza sativa | QTL | CQAW8 | qtl_marker |
Oryza sativa Indica Group | Genomic DNA | G73725 | related_sequence |
Oryza sativa Indica Group | GSS | AQ074254 | related_sequence |
Oryza sativa Indica Group | Genomic DNA | G73725 | contained_in_sequence |
RG227 78-79 Autorad: Survey blot of the probe RG227 for the 78-79 population |