ID | 11540 |
---|---|
Name | RM229 |
Synonyms (1) | CT224 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM229 |
Repeat Motif | (TC)11(CT)5C3(CT)5 |
Anneal Temperature | 55 |
Expected PCR Product Size | 116 |
Sequence Source | AF344049 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
---|---|
Gramene Diversity Rice Marker | 123 |
Gramene Diversity Rice Marker | 1241 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 18,407,879-18,408,009 bp | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAB064 | qtl_marker |
Oryza sativa | QTL | AQAE025 | qtl_marker |
Oryza sativa | QTL | AQAG039 | qtl_marker |
Oryza sativa | QTL | AQAI025 | qtl_marker |
Oryza sativa | QTL | AQCG004 | qtl_marker |
Oryza sativa | QTL | AQCU050 | qtl_marker |
Oryza sativa | QTL | AQCU051 | qtl_marker |
Oryza sativa | QTL | AQCU081 | qtl_marker |
Oryza sativa | QTL | AQCU091 | qtl_marker |
Oryza sativa | QTL | AQCU099 | qtl_marker |
Oryza sativa | QTL | AQCU195 | qtl_marker |
Oryza sativa | QTL | AQCU247 | qtl_marker |
Oryza sativa | QTL | AQCU251 | qtl_marker |
Oryza sativa | QTL | AQCU261 | qtl_marker |
Oryza sativa | QTL | AQCY018 | qtl_marker |
Oryza sativa | QTL | AQCY019 | qtl_marker |
Oryza sativa | QTL | AQCY027 | qtl_marker |
Oryza sativa | QTL | AQE048 | qtl_marker |
Oryza sativa | QTL | AQED005 | qtl_marker |
Oryza sativa | QTL | AQEI123 | qtl_marker |
Oryza sativa | QTL | AQEI140 | qtl_marker |
Oryza sativa | QTL | AQEJ022 | qtl_marker |
Oryza sativa | QTL | AQEJ023 | qtl_marker |
Oryza sativa | QTL | AQFJ075 | qtl_marker |
Oryza sativa | QTL | AQFR033 | qtl_marker |
Oryza sativa | QTL | AQFU008 | qtl_marker |
Oryza sativa | QTL | AQFU023 | qtl_marker |
Oryza sativa | QTL | AQFU043 | qtl_marker |
Oryza sativa | QTL | AQGA002 | qtl_marker |
Oryza sativa | QTL | AQGA016 | qtl_marker |
Oryza sativa | QTL | AQGI087 | qtl_marker |
Oryza sativa | QTL | AQGI093 | qtl_marker |
Oryza sativa | QTL | AQGI145 | qtl_marker |
Oryza sativa | QTL | AQGI186 | qtl_marker |
Oryza sativa | QTL | AQGI234 | qtl_marker |
Oryza sativa | QTL | AQGI271 | qtl_marker |
Oryza sativa | QTL | AQHR026 | qtl_marker |
Oryza sativa | QTL | AQHR060 | qtl_marker |
Oryza sativa | QTL | AQHR061 | qtl_marker |
Oryza sativa | QTL | AQHR062 | qtl_marker |
Oryza sativa | QTL | AQS004 | qtl_marker |
Oryza sativa | QTL | AQT016 | qtl_marker |
Oryza sativa | QTL | AQT030 | qtl_marker |
Oryza sativa | QTL | CQAE12 | qtl_marker |
Oryza sativa | QTL | CQAE18 | qtl_marker |
Oryza sativa | QTL | CQAE22 | qtl_marker |
Oryza sativa | QTL | CQAE25 | qtl_marker |
Oryza sativa Indica Group | Primer | RM229_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM229_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344049 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344049 | source_sequence |
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