ID | 11533 |
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Name | RM224 |
Synonyms (1) | CT199 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM224 |
Repeat Motif | (AAG)8(AG)13 |
Anneal Temperature | 55 |
Expected PCR Product Size | 157 |
Sequence Source | AF344045 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
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Gramene Diversity Rice Marker | 217 |
Gramene Diversity Rice Marker | 1237 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 2001 | BNL6.32 | 11 | 123.4-123.4 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 11 | 106-106 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAP050 | qtl_marker |
Oryza sativa | QTL | AQAQ017 | qtl_marker |
Oryza sativa | QTL | AQAR001 | qtl_marker |
Oryza sativa | QTL | AQAR002 | qtl_marker |
Oryza sativa | QTL | AQBK033 | qtl_marker |
Oryza sativa | QTL | AQCE003 | qtl_marker |
Oryza sativa | QTL | AQCE013 | qtl_marker |
Oryza sativa | QTL | AQCE021 | qtl_marker |
Oryza sativa | QTL | AQCE031 | qtl_marker |
Oryza sativa | QTL | AQCE041 | qtl_marker |
Oryza sativa | QTL | AQCE050 | qtl_marker |
Oryza sativa | QTL | AQCF046 | qtl_marker |
Oryza sativa | QTL | AQCU077 | qtl_marker |
Oryza sativa | QTL | AQCU193 | qtl_marker |
Oryza sativa | QTL | AQE048 | qtl_marker |
Oryza sativa | QTL | AQE072 | qtl_marker |
Oryza sativa | QTL | AQED030 | qtl_marker |
Oryza sativa | QTL | AQEJ076 | qtl_marker |
Oryza sativa | QTL | AQEJ078 | qtl_marker |
Oryza sativa | QTL | AQEX036 | qtl_marker |
Oryza sativa | QTL | AQEY014 | qtl_marker |
Oryza sativa | QTL | AQFA013 | qtl_marker |
Oryza sativa | QTL | AQFE035 | qtl_marker |
Oryza sativa | QTL | AQFP007 | qtl_marker |
Oryza sativa | QTL | AQFR041 | qtl_marker |
Oryza sativa | QTL | AQFU046 | qtl_marker |
Oryza sativa | QTL | AQFU047 | qtl_marker |
Oryza sativa | QTL | AQFU048 | qtl_marker |
Oryza sativa | QTL | AQFU049 | qtl_marker |
Oryza sativa | QTL | AQGE012 | qtl_marker |
Oryza sativa | QTL | AQGI090 | qtl_marker |
Oryza sativa | QTL | AQGI123 | qtl_marker |
Oryza sativa | QTL | AQGI187 | qtl_marker |
Oryza sativa | QTL | AQHJ004 | qtl_marker |
Oryza sativa | QTL | AQHJ009 | qtl_marker |
Oryza sativa | QTL | CQAE23 | qtl_marker |
Oryza sativa Indica Group | Primer | RM224_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM224_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344045 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344045 | source_sequence |
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