ID | 11489 |
---|---|
Name | RM215 |
Synonyms (1) | CT100 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM215 |
Repeat Motif | (CT)16 |
Anneal Temperature | 55 |
Expected PCR Product Size | 148 |
Sequence Source | AF344036 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
---|---|
Gramene Diversity Rice Marker | 83 |
Gramene Diversity Rice Marker | 1233 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 21,189,110-21,189,283 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 9 | 99.4-99.4 cM | View Comparative Map | |||
|
||||||||
IGCN 1998 | BNL6.32 | 9 | 138.9-138.9 cM | View Comparative Map | ||||
|
||||||||
TTU CTIR 2000 | BNL6.32 | 9 | 82.9-82.9 cM | View Comparative Map | ||||
|
||||||||
QTL | CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 9 | 13.5-13.5 cM | View Comparative Map | |||
|
||||||||
CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 9 | 71-71 cM | View Comparative Map | ||||
|
||||||||
CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 9b | 90-90 cM | View Comparative Map | ||||
|
||||||||
CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 9 | 8.5-8.5 cM | View Comparative Map | ||||
|
||||||||
CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 9 | 78.2-78.2 cM | View Comparative Map | ||||
|
||||||||
CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 9 | 207.1-207.1 cM | View Comparative Map | ||||
|
||||||||
CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 9 | 207.1-207.1 cM | View Comparative Map | ||||
|
||||||||
Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 9 | 99.4-99.4 cM | View Comparative Map | ||||
|
||||||||
Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 9 | 105.2-105.2 cM | View Comparative Map | ||||
|
||||||||
Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 9 | 80.4-80.4 cM | View Comparative Map | ||||
|
||||||||
Cornell V20A/glab QTL 2004 | BNL6.32 | 9 | 44.9-44.9 cM | View Comparative Map | ||||
|
||||||||
CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 9 | 82.9-82.9 cM | View Comparative Map | ||||
|
||||||||
IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 9 | 138.9-138.9 cM | View Comparative Map | ||||
|
||||||||
IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 9 | 159-159 cM | View Comparative Map | ||||
|
||||||||
IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 9 | 92.5-92.5 cM | View Comparative Map | ||||
|
||||||||
JHPRC Rei/Yamd QTL 2002 | BNL6.32 | 9 | 132-132 cM | View Comparative Map | ||||
|
||||||||
M202/IR50 UCD QTL 2003 | BNL6.32 | 9 | 60.8-60.8 cM | View Comparative Map | ||||
|
||||||||
MU CT9993/IR6226 QTL 2004 | BNL6.32 | 9 | 91.8-91.8 cM | View Comparative Map | ||||
|
||||||||
NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 9 | 93.3-93.3 cM | View Comparative Map | ||||
|
||||||||
TKU Integrated QTL 2002 | BNL6.32 | 9 | 85.2-85.2 cM | View Comparative Map | ||||
|
||||||||
TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 9 | 65.2-65.2 cM | View Comparative Map | ||||
|
||||||||
TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 9 | 194.8-194.8 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 9 | 83-83 cM | View Comparative Map | |||
|
|