ID | 11479 |
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Name | RM288 |
Synonyms (1) | CT843 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM288 |
Repeat Motif | (GA)7G6(GA)7 |
Anneal Temperature | 55 |
Expected PCR Product Size | 125 |
Sequence Source | AF344114 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 18,562,723-18,562,846 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 9 | 74.6-74.6 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 9 | 82.1-82.1 cM | View Comparative Map | ||||
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QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 9 | 74.6-74.6 cM | View Comparative Map | |||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 9 | 64.4-64.4 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 9 | 26-26 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 9 | 42.4-42.4 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAV002 | qtl_marker |
Oryza sativa | QTL | AQFU045 | qtl_marker |
Oryza sativa | QTL | AQGM029 | qtl_marker |
Oryza sativa | QTL | AQGP021 | qtl_marker |
Oryza sativa | QTL | AQGP041 | qtl_marker |
Oryza sativa | QTL | AQGP057 | qtl_marker |
Oryza sativa Indica Group | Primer | RM288_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM288_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344114 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344114 | source_sequence |
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