ID | 11477 |
---|---|
Name | RM242 |
Synonyms (1) | CT410 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM242 |
Repeat Motif | (CT)26 |
Anneal Temperature | 55 |
Expected PCR Product Size | 225 |
Sequence Source | AF344062 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
---|---|
Gramene Diversity Rice Marker | 381 |
Gramene Diversity Rice Marker | 1248 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 18,810,067-18,810,331 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 9 | 18,810,120-18,810,315 bp | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 9 | 73.3-73.3 cM | View Comparative Map | |||
|
||||||||
IGCN 1998 | BNL6.32 | 9 | 101.7-101.7 cM | View Comparative Map | ||||
|
||||||||
IRMI 2003 | BNL6.32 | 9 | 72.1-72.1 cM | View Comparative Map | ||||
|
||||||||
TTU CTIR 2000 | BNL6.32 | 9 | 68.2-68.2 cM | View Comparative Map | ||||
|
||||||||
QTL | Aberdeen Bala/Azu QTL 2002 | BNL6.32 | 9 | 69.1-69.1 cM | View Comparative Map | |||
|
||||||||
CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 9b | 43.6-43.6 cM | View Comparative Map | ||||
|
||||||||
CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 9b | 0-0 cM | View Comparative Map | ||||
|
||||||||
CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 9b | 13.32-13.32 cM | View Comparative Map | ||||
|
||||||||
CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 9 | 129.2-129.2 cM | View Comparative Map | ||||
|
||||||||
CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 9 | 129.2-129.2 cM | View Comparative Map | ||||
|
||||||||
Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 9 | 73.3-73.3 cM | View Comparative Map | ||||
|
||||||||
Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 9 | 66.6-88.2 cM | View Comparative Map | ||||
|
||||||||
Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 9 | 65.9-65.9 cM | View Comparative Map | ||||
|
||||||||
CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 9 | 68.2-68.2 cM | View Comparative Map | ||||
|
||||||||
IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 9 | 101.7-101.7 cM | View Comparative Map | ||||
|
||||||||
IGCN ZYQ8/JX17 RI QTL 2001 | BNL6.32 | 9 | 0-86.8 cM | View Comparative Map | ||||
|
||||||||
INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 9 | 23.8-23.8 cM | View Comparative Map | ||||
|
||||||||
IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 9 | 137.1-137.1 cM | View Comparative Map | ||||
|
||||||||
IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 9 | 58.3-58.3 cM | View Comparative Map | ||||
|
||||||||
JUT Patnai/Goai F2 QTL 2004 | BNL6.32 | 9 | 74.6-74.6 cM | View Comparative Map | ||||
|
||||||||
M202/IR50 UCD QTL 2003 | BNL6.32 | 9 | 41.4-41.4 cM | View Comparative Map | ||||
|
||||||||
MU CT9993/IR6226 QTL 2004 | BNL6.32 | 9 | 68.3-68.3 cM | View Comparative Map | ||||
|
||||||||
NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 9 | 82.4-82.4 cM | View Comparative Map | ||||
|
||||||||
Sussex IR55178 QTL 2001 | BNL6.32 | 9 | 38.7-38.7 cM | View Comparative Map | ||||
|
||||||||
TKU Integrated QTL 2002 | BNL6.32 | 9 | 68.3-68.3 cM | View Comparative Map | ||||
|
||||||||
TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 9 | 52.8-52.8 cM | View Comparative Map | ||||
|
||||||||
TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 9 | 130.8-130.8 cM | View Comparative Map | ||||
|
|