ID | 11400 |
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Name | RM432 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM432 |
Repeat Motif | (CATC)9 |
Anneal Temperature | 55 |
Expected PCR Product Size | 187 |
Sequence Source | AQ273736 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 18,958,597-18,958,782 bp | View Comparative Map | |||
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BNL6.32 | Chr. 7 | 18,958,599-18,958,785 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 7 | 43.5-43.5 cM | View Comparative Map | |||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 7 | 17.3-17.3 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 7 | 70.4-70.4 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 7 | 43.5-43.5 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA024 | qtl_marker |
Oryza sativa | QTL | AQA026 | qtl_marker |
Oryza sativa | QTL | AQA047 | qtl_marker |
Oryza sativa | QTL | AQGA012 | qtl_marker |
Oryza sativa | QTL | AQGA021 | qtl_marker |
Oryza sativa | QTL | AQGH007 | qtl_marker |
Oryza sativa | QTL | AQGH010 | qtl_marker |
Oryza sativa | QTL | AQGH016 | qtl_marker |
Oryza sativa | QTL | AQGH024 | qtl_marker |
Oryza sativa | QTL | AQGH027 | qtl_marker |
Oryza sativa | QTL | AQGH033 | qtl_marker |
Oryza sativa | QTL | AQGP020 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT21652 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM432_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM432_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ273736 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ273736 | source_sequence |