ID | 11399 |
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Name | RM418 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM418 |
Repeat Motif | (ATT)21 |
Anneal Temperature | 55 |
Expected PCR Product Size | 283 |
Sequence Source | AQ163641 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 18,132,231-18,132,514 bp | View Comparative Map | |||
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BNL6.32 | Chr. 7 | 18,132,253-18,132,520 bp | View Comparative Map | |||||
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BNL6.32 | Chr. 7 | 18,132,253-18,132,520 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 7 | 42.1-42.1 cM | View Comparative Map | |||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 7 | 15.6-15.6 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 7 | 67.7-67.7 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 7 | 42.1-42.1 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA024 | qtl_marker |
Oryza sativa | QTL | AQA026 | qtl_marker |
Oryza sativa | QTL | AQA047 | qtl_marker |
Oryza sativa | QTL | AQGA012 | qtl_marker |
Oryza sativa | QTL | AQGA021 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT21612 | equivalent_to |
Oryza sativa Japonica Group | SSR | AUT21613 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM418_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM418_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ163641 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ163641 | source_sequence |