ID | 11365 |
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Name | RM539 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM539 |
Repeat Motif | (TAT)21 |
Anneal Temperature | 55 |
Expected PCR Product Size | 272 |
Sequence Source | AQ861571 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 6 | 45.1-45.1 cM | View Comparative Map | |||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 6 | 58.3-58.3 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 6 | 55.6-55.6 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 6 | 45.1-45.1 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 6 | 97.1-97.1 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 6 | 40.74-40.74 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA023 | qtl_marker |
Oryza sativa | QTL | AQEE023 | qtl_marker |
Oryza sativa | QTL | AQGM011 | qtl_marker |
Oryza sativa | QTL | AQHF008 | qtl_marker |
Oryza sativa | QTL | AQHF012 | qtl_marker |
Oryza sativa | QTL | AQHF036 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM539_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM539_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ861571 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ861571 | source_sequence |