ID | 11311 |
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Name | RM267 |
Synonyms (1) | CT606 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM267 |
Repeat Motif | (GA)21 |
Anneal Temperature | 55 |
Expected PCR Product Size | 156 |
Sequence Source | AF344094 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 2,881,317-2,881,455 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 5 | 28.6-31.4 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 5 | 25-25 cM | View Comparative Map | ||||
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QTL | CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 5 | 29.2-29.2 cM | View Comparative Map | |||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 5 | 48.9-48.9 cM | View Comparative Map | ||||
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CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 5 | 92.7-92.7 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 5 | 30-30 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 5 | 43.6-43.6 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 5 | 19.5-19.5 cM | View Comparative Map | ||||
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INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 5 | 31.2-31.2 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 5 | 23.36-23.36 cM | View Comparative Map | ||||
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JUT IR36/Genj QTL 2004 | BNL6.32 | 5 | 14.2-14.2 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 5 | 24-24 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 5 | 25.3-25.3 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQA037 | qtl_marker |
Oryza sativa | QTL | AQB007 | qtl_marker |
Oryza sativa | QTL | AQFE062 | qtl_marker |
Oryza sativa | QTL | AQFP005 | qtl_marker |
Oryza sativa | QTL | AQFP012 | qtl_marker |
Oryza sativa | QTL | AQFP027 | qtl_marker |
Oryza sativa | QTL | AQFP032 | qtl_marker |
Oryza sativa | QTL | AQGP022 | qtl_marker |
Oryza sativa | QTL | AQGP035 | qtl_marker |
Oryza sativa | QTL | AQGP047 | qtl_marker |
Oryza sativa | QTL | AQGS013 | qtl_marker |
Oryza sativa | QTL | AQGS018 | qtl_marker |
Oryza sativa | QTL | AQGS022 | qtl_marker |
Oryza sativa | QTL | AQJ009 | qtl_marker |
Oryza sativa Indica Group | Primer | RM267_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM267_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344094 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344094 | source_sequence |
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