ID | 11288 |
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Name | RM334 |
Synonyms (1) | CTT48 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM334 |
Repeat Motif | (CTT)20 |
Anneal Temperature | 55 |
Expected PCR Product Size | 182 |
Sequence Source | AF344158 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 5 | 141.8-141.8 cM | View Comparative Map | |||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 5 | 158.6-158.6 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 5 | 111.7-111.7 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 5 | 141.2-141.2 cM | View Comparative Map | ||||
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CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 5 | 141.6-141.6 cM | View Comparative Map | ||||
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CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 5 | 0-0 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 5 | 141.8-141.8 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 5 | 156.2-156.2 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 5 | 134.8-134.8 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 5 | 161.6-161.6 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 5 | 122.24-122.24 cM | View Comparative Map | ||||
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JUT IR36/Genj QTL 2004 | BNL6.32 | 5 | 128.3-128.3 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 5 | 120-120 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 5 | 156-156 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 5 | 96.9-96.9 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAV006 | qtl_marker |
Oryza sativa | QTL | AQEE015 | qtl_marker |
Oryza sativa | QTL | AQEE019 | qtl_marker |
Oryza sativa | QTL | AQEI039 | qtl_marker |
Oryza sativa | QTL | AQEI135 | qtl_marker |
Oryza sativa | QTL | AQFE096 | qtl_marker |
Oryza sativa | QTL | AQFE097 | qtl_marker |
Oryza sativa | QTL | AQFJ037 | qtl_marker |
Oryza sativa | QTL | AQHF003 | qtl_marker |
Oryza sativa | QTL | AQHF004 | qtl_marker |
Oryza sativa | QTL | AQHF011 | qtl_marker |
Oryza sativa | QTL | AQHF033 | qtl_marker |
Oryza sativa Indica Group | Primer | RM334_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM334_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344158 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344158 | source_sequence |
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