ID | 11219 |
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Name | RM520 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM520 |
Repeat Motif | (AG)10 |
Anneal Temperature | 55 |
Expected PCR Product Size | 247 |
Sequence Source | AQ690961 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 30,912,691-30,912,804 bp | View Comparative Map | |||
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BNL6.32 | Chr. 3 | 30,912,728-30,912,974 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 3 | 191.6-191.6 cM | View Comparative Map | |||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 3 | 170.4-170.4 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 3 | 135.3-135.3 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 3 | 173.2-173.2 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 191.6-191.6 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 3 | 171.1-171.1 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 3 | 200.4-200.4 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQED044 | qtl_marker |
Oryza sativa | QTL | AQED045 | qtl_marker |
Oryza sativa | QTL | AQEI010 | qtl_marker |
Oryza sativa | QTL | AQEI011 | qtl_marker |
Oryza sativa | QTL | AQEI054 | qtl_marker |
Oryza sativa | QTL | AQEI055 | qtl_marker |
Oryza sativa | QTL | AQEI064 | qtl_marker |
Oryza sativa | QTL | AQEI071 | qtl_marker |
Oryza sativa | QTL | AQEI089 | qtl_marker |
Oryza sativa | QTL | AQEI118 | qtl_marker |
Oryza sativa | QTL | AQFJ059 | qtl_marker |
Oryza sativa | QTL | AQGD016 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT15927 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM520_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM520_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ690961 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ690961 | source_sequence |