ID | 11134 | ||||
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Name | RM145 | ||||
Synonyms (3) |
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Type | SSR | ||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM145 |
Repeat Motif | |
Anneal Temperature | |
Expected PCR Product Size | 0 |
Sequence Source | |
Linkage Group | |
Remarks |
AAGCTTTACACATGATCCAGATCATGTTTGAAAACAAAATACTAGTGATAGATCACGCTTCAGAACGAACCAGCGGTATC
AGCATGCTTTTATTTCAGAATGGAACTAAAAATGAATCAAGAACCAAAGATTATTGAAGCTCATATCTACAAAACACAGC
AGGTATAGCTCAGATCCGCACATGCACAAGTAATCAAGCATTGAAGCTAACTGGAAGAGACAGGGAGGGATCTCGTTCTG
ACATGTTGAGGTTGCCGGCGATCCGGCGCTCGGNCTCGCGCACGCACTCGAGCACGACGGGCTTGCCGTTGTCGTCCCGG
TAGGCGCCCTGCAGTTTCAGCATCCCCGCCCAACATCTCCGTCAGAATCAAGCGAGATCGGGGATCCCAATGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACGTACGACGCCGACGTTGACTTTGTCG
GGGGAGGGGTCGGCGAGGAAGGCCTCGGTGACGCCGAGGATGGGGTCCTTGGAAGCCGGCTCGACGTGGCCGAACAGCGA
CGCCATCGCCCTCGTCGCGTGCCTCCTCGCCCTCGCCAGCGCCCCGACCCGCCGCCCCCGGATCGCGGCCGCCGAGCGGG
ACGACGACATCGCCATGGCTGGCGGATGGGCGGCGCGGCAGCGAGGAGGAGGAGGTGGAGACTGGAGAGCAAAGCAGTGA
GGGGGAGAAAAGCTGTGGGTGTGTGGGTTTTGGTTTGGTGGTTTTCGCGAGGAAGGAGGCCAAAAGAAAAGGTGTCTCGC
TTTGATGATTCCTTGCGTCGTCCTCCGAAGCTT
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 7,706,705-7,707,073 bp | View Comparative Map | |||
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BNL6.32 | Chr. 2 | 7,706,893-7,707,107 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 2 | 49.8-49.8 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 2 | 36.8-36.8 cM | View Comparative Map | ||||
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QTL | AGEBC KDM105/CT999 RI QTL 2000 | BNL6.32 | 2a | 0-0 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 2 | 40.7-40.7 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 2 | 85.8-85.8 cM | View Comparative Map | ||||
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CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 2 | 56.71-56.71 cM | View Comparative Map | ||||
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BNL6.32 | 2 | 57.51-57.51 cM | View Comparative Map | |||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 49.8-49.8 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 2 | 9.3-9.3 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 2 | 50-50 cM | View Comparative Map | ||||
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JHPRC Rei/Yamd QTL 2002 | BNL6.32 | 2a | 68.2-68.2 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 2 | 39.56-39.56 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 2 | 45.2-45.2 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQCD001 | qtl_marker |
Oryza sativa | QTL | AQDX004 | qtl_marker |
Oryza sativa | QTL | AQEI046 | qtl_marker |
Oryza sativa | QTL | AQEI102 | qtl_marker |
Oryza sativa | QTL | AQEI103 | qtl_marker |
Oryza sativa | QTL | AQT002 | qtl_marker |
Oryza sativa | QTL | AQT007 | qtl_marker |
Oryza sativa | QTL | AQT021 | qtl_marker |
Oryza sativa | QTL | AQT033 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT12806 | equivalent_to |
Oryza sativa Japonica Group | Genomic DNA | D16340 | contained_in_sequence |
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