ID | 11132 |
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Name | RM71 |
Synonyms (1) | ATT20 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM71 |
Repeat Motif | (ATT)10T(ATT)4 |
Anneal Temperature | 55 |
Expected PCR Product Size | 149 |
Sequence Source | AF344085 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 8,760,433-8,760,557 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 2 | 49.8-49.8 cM | View Comparative Map | |||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 2 | 53.4-53.4 cM | View Comparative Map | |||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 2 | 81.6-81.6 cM | View Comparative Map | ||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 2 | 57.5-57.5 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 49.8-49.8 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 2 | 60.5-60.5 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 2 | 40.1-40.1 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 2 | 47-47 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 2 | 63.9-63.9 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 2 | 36.5-36.5 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAM036 | qtl_marker |
Oryza sativa | QTL | AQAM037 | qtl_marker |
Oryza sativa | QTL | AQAV001 | qtl_marker |
Oryza sativa | QTL | AQAV004 | qtl_marker |
Oryza sativa Indica Group | Primer | RM71_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM71_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344085 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344085 | source_sequence |
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