ID | 11129 |
---|---|
Name | RM48 |
Synonyms (1) | GA479 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM48 |
Repeat Motif | (GA)17 |
Anneal Temperature | 55 |
Expected PCR Product Size | 204 |
Sequence Source | AF343857 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
---|---|
Gramene Diversity Rice Marker | 280 |
Gramene Diversity Rice Marker | 1260 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 2 | 190.2-191.2 cM | View Comparative Map | |||
|
||||||||
IGCN 1998 | BNL6.32 | 2 | 14.9-14.9 cM | View Comparative Map | ||||
|
||||||||
KRGRP 1998 | BNL6.32 | 2 | 159.8-159.8 cM | View Comparative Map | ||||
|
||||||||
QTL | CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 2 | 193-193 cM | View Comparative Map | |||
|
||||||||
CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 2 | 193.6-193.6 cM | View Comparative Map | ||||
|
||||||||
CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 2b | 51.2-51.2 cM | View Comparative Map | ||||
|
||||||||
Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 190.7-190.7 cM | View Comparative Map | ||||
|
||||||||
IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 2 | 201.3-201.3 cM | View Comparative Map | ||||
|
||||||||
IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 2 | 14.9-14.9 cM | View Comparative Map | ||||
|
||||||||
JHPRC Rei/Yamd QTL 2002 | BNL6.32 | 2b | 75.4-75.4 cM | View Comparative Map | ||||
|
||||||||
KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 2 | 159.8-159.8 cM | View Comparative Map | ||||
|
||||||||
M202/IR50 UCD QTL 2003 | BNL6.32 | 2 | 134-134 cM | View Comparative Map | ||||
|
||||||||
TKU Integrated QTL 2002 | BNL6.32 | 2 | 147.3-147.3 cM | View Comparative Map | ||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA029 | qtl_marker |
Oryza sativa | QTL | AQAG016 | qtl_marker |
Oryza sativa | QTL | AQEX002 | qtl_marker |
Oryza sativa | QTL | AQFP028 | qtl_marker |
Oryza sativa | QTL | AQGI076 | qtl_marker |
Oryza sativa | QTL | AQGI120 | qtl_marker |
Oryza sativa | QTL | AQGI200 | qtl_marker |
Oryza sativa | QTL | AQGI208 | qtl_marker |
Oryza sativa | QTL | AQHR034 | qtl_marker |
Oryza sativa | QTL | AQHR035 | qtl_marker |
Oryza sativa | QTL | AQQ012 | qtl_marker |
Oryza sativa | QTL | CQAE1 | qtl_marker |
Oryza sativa | QTL | CQAE16 | qtl_marker |
Oryza sativa | QTL | CQAE7 | qtl_marker |
Oryza sativa | QTL | CQAE8 | qtl_marker |
Oryza sativa Indica Group | Primer | RM48_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM48_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF343857 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF343857 | source_sequence |
|