ID | 11054 |
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Name | RM259 |
Synonyms (1) | CT550 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM259 |
Repeat Motif | (CT)17 |
Anneal Temperature | 55 |
Expected PCR Product Size | 162 |
Sequence Source | AF344078 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
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Gramene Diversity Rice Marker | 38 |
Gramene Diversity Rice Marker | 1255 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 7,445,627-7,445,919 bp | View Comparative Map | |||
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BNL6.32 | Chr. 1 | 7,445,642-7,445,813 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 1 | 54.2-54.2 cM | View Comparative Map | |||
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IGCN 1998 | BNL6.32 | 1 | 233.2-233.2 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 1 | 38.8-38.8 cM | View Comparative Map | ||||
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KRGRP 1998 | BNL6.32 | 2 | 21.2-21.2 cM | View Comparative Map | ||||
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QTL | Brazil BG90-2/RS16 QTL 2002 | BNL6.32 | 1 | 71.8-71.8 cM | View Comparative Map | |||
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CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 1a | 7.1-7.1 cM | View Comparative Map | ||||
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CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 1 | 56.5-56.5 cM | View Comparative Map | ||||
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CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 1 | 48-48 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 1 | 42.8-42.8 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 54.2-54.2 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 1 | 41.1-41.1 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 1 | 57.7-57.7 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 1 | 233.2-233.2 cM | View Comparative Map | ||||
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INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 1 | 66.3-66.3 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 1 | 119.2-119.2 cM | View Comparative Map | ||||
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IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 1 | 70.6-70.6 cM | View Comparative Map | ||||
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JHPRC Rei/Yamd QTL 2002 | BNL6.32 | 1a | 55.1-55.1 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 2 | 21.2-21.2 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 1 | 26.8-26.8 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 1 | 61.6-61.6 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 1b | 83.9-83.9 cM | View Comparative Map | ||||
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