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Oryza sativa Indica Group SSR "RM202"
| ID | 11002 |
|---|---|
| Name | RM202 |
| Synonyms (1) | CT14 |
| Type | SSR |
| Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
| Germplasm | |
| Description | |
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | RM202 |
| Repeat Motif | (CT)30 |
| Anneal Temperature | 55 |
| Expected PCR Product Size | 189 |
| Sequence Source | AF344024 |
| Linkage Group | |
| Remarks |
Database Cross-References (2)
Sequences (4)
Related Sequences (4)
Align All Sequences
Map Positions (25)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 9,001,608-9,001,898 bp | View Comparative Map | |||
|
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| BNL6.32 | Chr. 11 | 9,001,672-9,001,849 bp | View Comparative Map | |||||
|
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell RFLP 2001 | BNL6.32 | 11 | 56.6-56.6 cM | View Comparative Map | |||
|
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Associations (48)
| Species | Type | Name | Assoc. Type |
|---|---|---|---|
| Oryza sativa | QTL | AQCG004 | qtl_marker |
| Oryza sativa | QTL | AQCU042 | qtl_marker |
| Oryza sativa | QTL | AQCU043 | qtl_marker |
| Oryza sativa | QTL | AQCU050 | qtl_marker |
| Oryza sativa | QTL | AQCU051 | qtl_marker |
| Oryza sativa | QTL | AQCU081 | qtl_marker |
| Oryza sativa | QTL | AQCU091 | qtl_marker |
| Oryza sativa | QTL | AQCU099 | qtl_marker |
| Oryza sativa | QTL | AQCU165 | qtl_marker |
| Oryza sativa | QTL | AQCU177 | qtl_marker |
| Oryza sativa | QTL | AQCU178 | qtl_marker |
| Oryza sativa | QTL | AQCU195 | qtl_marker |
| Oryza sativa | QTL | AQCU247 | qtl_marker |
| Oryza sativa | QTL | AQCU251 | qtl_marker |
| Oryza sativa | QTL | AQCU261 | qtl_marker |
| Oryza sativa | QTL | AQDJ008 | qtl_marker |
| Oryza sativa | QTL | AQE034 | qtl_marker |
| Oryza sativa | QTL | AQE046 | qtl_marker |
| Oryza sativa | QTL | AQE079 | qtl_marker |
| Oryza sativa | QTL | AQE090 | qtl_marker |
| Oryza sativa | QTL | AQED005 | qtl_marker |
| Oryza sativa | QTL | AQED017 | qtl_marker |
| Oryza sativa | QTL | AQED018 | qtl_marker |
| Oryza sativa | QTL | AQED029 | qtl_marker |
| Oryza sativa | QTL | AQEE039 | qtl_marker |
| Oryza sativa | QTL | AQEJ022 | qtl_marker |
| Oryza sativa | QTL | AQEJ023 | qtl_marker |
| Oryza sativa | QTL | AQFP003 | qtl_marker |
| Oryza sativa | QTL | AQFQ008 | qtl_marker |
| Oryza sativa | QTL | AQFU008 | qtl_marker |
| Oryza sativa | QTL | AQFU023 | qtl_marker |
| Oryza sativa | QTL | AQFU041 | qtl_marker |
| Oryza sativa | QTL | AQFU043 | qtl_marker |
| Oryza sativa | QTL | AQGA033 | qtl_marker |
| Oryza sativa | QTL | AQGA041 | qtl_marker |
| Oryza sativa | QTL | AQGP024 | qtl_marker |
| Oryza sativa | QTL | AQGP059 | qtl_marker |
| Oryza sativa | QTL | AQHJ004 | qtl_marker |
| Oryza sativa | QTL | AQHJ009 | qtl_marker |
| Oryza sativa Japonica Group | SSR | AUT26402 | equivalent_to |
| Oryza sativa | QTL | CQAE12 | qtl_marker |
| Oryza sativa | QTL | CQAE18 | qtl_marker |
| Oryza sativa | QTL | CQAE22 | qtl_marker |
| Oryza sativa | QTL | CQAE25 | qtl_marker |
| Oryza sativa Indica Group | Primer | RM202_forward | primer_forward |
| Oryza sativa Indica Group | Primer | RM202_reverse | primer_reverse |
| Oryza sativa Indica Group | Genomic DNA | AF344024 | contained_in_sequence |
| Oryza sativa Indica Group | Genomic DNA | AF344024 | source_sequence |
Associated Ontologies (0)
Images (0)
