ID | 10906 |
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Name | RM502 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM502 |
Repeat Motif | (TG)10 |
Anneal Temperature | 55 |
Expected PCR Product Size | 266 |
Sequence Source | AQ575075 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 26,492,117-26,492,381 bp | View Comparative Map | |||
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BNL6.32 | Chr. 8 | 26,492,216-26,492,387 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 8 | 131-131 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 8 | 121.8-121.8 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 8 | 109.3-109.3 cM | View Comparative Map | ||||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 8 | 98.7-98.7 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 8 | 108.7-108.7 cM | View Comparative Map | ||||
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CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 8 | 182.3-182.3 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 8 | 121.8-121.8 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 8 | 119.6-119.6 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA010 | qtl_marker |
Oryza sativa | QTL | AQA038 | qtl_marker |
Oryza sativa | QTL | AQEE001 | qtl_marker |
Oryza sativa | QTL | AQEE003 | qtl_marker |
Oryza sativa | QTL | AQGA037 | qtl_marker |
Oryza sativa | QTL | AQGA039 | qtl_marker |
Oryza sativa | QTL | AQGA043 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT23494 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM502_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM502_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ575075 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ575075 | source_sequence |