ID | 10905 |
---|---|
Name | RM447 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM447 |
Repeat Motif | (CTT)8 |
Anneal Temperature | 55 |
Expected PCR Product Size | 111 |
Sequence Source | AQ290369 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 26,546,992-26,547,102 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 8 | 26,546,992-26,547,103 bp | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 8 | 131.3-131.3 cM | View Comparative Map | |||
|
||||||||
Cornell SSR 2001 | BNL6.32 | 8 | 124.6-124.6 cM | View Comparative Map | ||||
|
||||||||
IRMI 2003 | BNL6.32 | 8 | 109.3-109.3 cM | View Comparative Map | ||||
|
||||||||
QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 8 | 100.4-100.4 cM | View Comparative Map | |||
|
||||||||
CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 8 | 188.9-188.9 cM | View Comparative Map | ||||
|
||||||||
Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 8 | 124.6-124.6 cM | View Comparative Map | ||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA010 | qtl_marker |
Oryza sativa | QTL | AQA038 | qtl_marker |
Oryza sativa | QTL | AQGA039 | qtl_marker |
Oryza sativa | QTL | AQGM023 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT23499 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM447_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM447_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ290369 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ290369 | source_sequence |