ID | 10904 |
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Name | RM477 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM477 |
Repeat Motif | (AATT)5 |
Anneal Temperature | 55 |
Expected PCR Product Size | 223 |
Sequence Source | AQ363058 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 28,075,160-28,075,382 bp | View Comparative Map | |||
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BNL6.32 | Chr. 8 | 28,075,215-28,075,494 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 8 | 139-139 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 8 | 121.8-124.6 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 8 | 120.4-120.4 cM | View Comparative Map | ||||
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QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 8 | 118.2-118.2 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 8 | 124.6-124.6 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 2001 | BNL6.32 | 8 | 123.6-123.6 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA010 | qtl_marker |
Oryza sativa | QTL | AQA038 | qtl_marker |
Oryza sativa | QTL | AQGM023 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT23613 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM477_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM477_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ363058 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ363058 | source_sequence |