ID | 10848 |
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Name | RM402 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM402 |
Repeat Motif | (ATA)7 |
Anneal Temperature | 55 |
Expected PCR Product Size | 133 |
Sequence Source | AQ050029 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 6,399,680-6,399,813 bp | View Comparative Map | |||
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BNL6.32 | Chr. 6 | 6,399,723-6,399,814 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 6 | 31.7-31.7 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 6 | 40.3-40.3 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 6 | 34.3-34.3 cM | View Comparative Map | ||||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 6 | 44.4-44.4 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 6 | 40.3-40.3 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 6 | 85.1-85.1 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQEE023 | qtl_marker |
Oryza sativa | QTL | AQGA003 | qtl_marker |
Oryza sativa | QTL | AQGA008 | qtl_marker |
Oryza sativa | QTL | AQGA022 | qtl_marker |
Oryza sativa | QTL | AQGA026 | qtl_marker |
Oryza sativa | QTL | AQGM011 | qtl_marker |
Oryza sativa | QTL | AQGP084 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT19640 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM402_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM402_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ050029 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ050029 | source_sequence |