ID | 10701 |
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Name | RM318 |
Synonyms (1) | GT338 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM318 |
Repeat Motif | (GT)15 |
Anneal Temperature | 55 |
Expected PCR Product Size | 140 |
Sequence Source | AF344143 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 29,631,532-29,631,707 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | CIAT SSR 2006 | BNL6.32 | 2 | 145.4-145.4 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 2 | 150.8-154.7 cM | View Comparative Map | ||||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 2 | 125.5-125.5 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 2 | 136.9-136.9 cM | View Comparative Map | ||||
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CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 2 | 143.32-143.32 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 152.75-152.75 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 2 | 125.8-125.8 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 2 | 85.1-85.1 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 2 | 106.2-106.2 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 2 | 129.9-129.9 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQFE007 | qtl_marker |
Oryza sativa | QTL | AQFE052 | qtl_marker |
Oryza sativa | QTL | AQFE069 | qtl_marker |
Oryza sativa | QTL | AQFE070 | qtl_marker |
Oryza sativa | QTL | AQFE114 | qtl_marker |
Oryza sativa | QTL | AQFU021 | qtl_marker |
Oryza sativa | QTL | AQHF027 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT13887 | equivalent_to |
Oryza sativa Indica Group | Primer | RM318_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM318_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344143 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344143 | source_sequence |
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