ID | 10700 |
---|---|
Name | RM425 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM425 |
Repeat Motif | (CGG)9 |
Anneal Temperature | 55 |
Expected PCR Product Size | 126 |
Sequence Source | AQ259183 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 32,297,904-32,298,091 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 2 | 32,297,950-32,298,075 bp | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 2 | 158.7-158.7 cM | View Comparative Map | |||
|
||||||||
Cornell SSR 2001 | BNL6.32 | 2 | 166-170.1 cM | View Comparative Map | ||||
|
||||||||
QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 168.05-168.05 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQGM025 | qtl_marker |
Oryza sativa | QTL | AQGP070 | qtl_marker |
Oryza sativa | QTL | AQJ005 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT13996 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM425_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM425_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ259183 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ259183 | source_sequence |