Oryza sativa Japonica Group EST "D15886"

ID	1138549
Name	D15886 (GenBank Accession )
Synonyms (0)	None.
Deprecated Gramene Marker Acc	D15886-3
GenBank GI	287081
GenBank Version	D15886.1
Type	EST
Species	Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ]
Germplasm
Description	RICC1468A Rice callus Oryza sativa Japonica Group cDNA clone C1468A, mRNA sequence.
Tags ()	None

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Details

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Marker Updated:
Internal Marker Accession:	D15886
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Database Cross-References (2)

PubMed	7987417
Gramene Literature	Sasaki-T, Song-J, Koga-Ban-Y, Matsui-E, Fang-F, Higo-H, Nagasaki-H, Hori-M, Miya-M, Murayama-Kayano-E, "Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library", The Plant journal : for cell and molecular biology, 1994, vol. 6, pp. 615-624

Sequences (3)

EST Sequence (1)

>D15886 Oryza sativa Japonica Group EST [408 bp].

 
          GGTTATCTCATCCCTGACCGCCTCCCTGAGGTTTGATGGTGCTCTGAACGTGGATGTCAATGAGTTCCAGACCAACCTTG
TGCCCTACCCAAGGATCCACTTCATGCTTTCGTCCTACGCTCCAGTGATCTCTGCGGAGAAGGCCTACCATGAGCAACTC
TCTGTTGCCGAGATCACCAACAGTGCCTTCGAGCCATCCTCCATGATGGCCAAGTGCGACCCTCGNCACGGCAAGTACAT
GGCCTGCTGCCTCATGTACCGCGGCGATGTCGTGCCCAAGGACGTGAACGNCGACGTCGGCACCATCAAGACCAAGNGNA
CCATNCAGTTCGTGGACTGGTGCCCGACGGGGTTCAAGTGCGGAATAAACTANCAGCCGCCAGGGTNGTCCCAGNGGTGA
CTTTGCAA

Related Sequences (2)

>SOG1473 Oryza sativa Japonica Group OVERGO [40 bp]. Associated to 'D15886' via contained_in_sequence

 
          ATCACCAACAGTGCCTTCGAGCCATCCTCCATGATGGCCA

>SOG1212 Oryza sativa Japonica Group OVERGO [40 bp]. Associated to 'D15886' via contained_in_sequence

 
          GTGCCCTACCCAAGGATCCACTTCATGCTTTCGTCCTACG

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Map Positions (0)

Associations (3)

Species	Type	Name	Assoc. Type
Oryza sativa	RFLP	C1468	related_sequence
Oryza sativa Japonica Group	OVERGO	SOG1473	contained_in_sequence
Oryza sativa Japonica Group	OVERGO	SOG1212	contained_in_sequence

Associated Ontologies (3)

Term Type	Term Name	Term Accession
Environment	tissue culture growth media	EO:0007266	Search
Growth Stage	in-vitro culture stage	GRO:0007000	Search
Plant Structure	cultured plant callus	PO:0000009	Search

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