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Zea mays EST "AW244189"
| ID | 773135 | ||||
|---|---|---|---|---|---|
| Name |
AW244189 (GenBank Accession  ) |
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| Synonyms (3) |
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| Deprecated Gramene Marker Acc | 48547551 | ||||
| GenBank GI | 6578052 | ||||
| GenBank Version | AW244189.1 | ||||
| MaizeGDB cDNA - EST | p-std687050D12 | ||||
| MAIZEGDB EST | si687050D12 | ||||
| Type | EST | ||||
| Species | Zea mays (Maize) [ GR_tax:014450 ] | ||||
| Germplasm | |||||
| Description | 687050D12.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence. | ||||
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | AW244189 |
| Clone | |
| Comment |
Contact: Walbot V Department of Biological Sciences Stanford University 855 California Ave, Palo Alto, CA 94304, USA Tel: 650 723 2227 Fax: 650 725 8221 Email: walbot@stanford.edu Plate: 687050 row: D column: 12. |
| Date Created | |
| Date Updated | |
| Lab Host | E. coli SOLR |
| Map | |
| Note |
Organ: embryo; Vector: pBluescript SK; Site_1: XhoI; Site_2: EcoRI; Library was prepared by Statagene using the Uni-ZAP XR system (Stratagene BN937328-12). Clones were picked by a Q-bot after blue/white selection (ampicillin resistance - use 100 micrograms/microliter). Developed from a pool of equal amounts of RNA from developing embryos sampled at 14, 21, 28 and 35 days after pollination of the Illinois High Oil Maize Strain Cycle 90. This closed strain has been selected for high oil concentration for 90 generations and originates from the 1890s era open pollinated variety Burr's White |
| Origin | |
| Ref Authors | Walbot,V. |
| Ref Location | Unpublished (1999) |
| Ref Medline | |
| Ref Pubmed | |
| Ref Title | Maize ESTs from various cDNA libraries sequenced at Stanford University |
| Ref Year | 1999 |
Database Cross-References (0)
Sequences (2)
EST Sequence (1)
Related Sequence (1)
Align All Sequences
Map Positions (8)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Physical | AGI FPC Oct 2004 | BNL6.32 | ctg6 | 31-32 bands | View Comparative Map | |||
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| BNL6.32 | ctg299 | 1,048-1,053 bands | View Comparative Map | |||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links |
|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 28,714,887-28,714,928 bp | |
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| BNL6.32 | Chr. 9 | 4,025-4,066 bp | |||
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| BNL6.32 | Chr. 9 | 11,953-11,994 bp | |||
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| BNL6.32 | Chr. 9 | 19,881-19,922 bp | |||
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| BNL6.32 | Chr. 9 | 27,809-27,850 bp | |||
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| BNL6.32 | Chr. 9 | 35,737-35,778 bp | |||
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Associations (1)
| Species | Type | Name | Assoc. Type |
|---|---|---|---|
| Zea mays subsp. mays | OVERGO | si687050D12_ov | contained_in_sequence |
Associated Ontologies (2)
| Term Type | Term Name | Term Accession | |
|---|---|---|---|
| Plant Structure | plant embryo | PO:0009009 | Search |
| Growth Stage | 07-linear grain-filling | GRO:0007029 | Search |
Images (0)
