ID | 4874 | ||||||||||
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Name | CDO1395 (GRAINGENES PROBE) | ||||||||||
Synonyms (10) |
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MAIZEGDB PROBE | p-cdo1395 | ||||||||||
Type | RFLP | ||||||||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||||||||
Germplasm | |||||||||||
Description | |||||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO1395 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | etiolated leaf |
Source Treatment | etiolated |
Vector | pBluSK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 2 |
Vector Excision Enzyme | EcoRI/XhoI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
CATATTGCTGCTGCCAGGATGCTATTGATATTGGCAGAAAGGCAGTGCTCCAATGCTGAAGAAGCTCCTGCTCTTGACCA
GAGGTATCAATATCTGAGCAATGCTGTGCTACAAGCCAAAAGTGCAGGCATTACCGCTGATTCGTCGAGAAATCCTATCG
ATAGTAGTACAGTGGATCTACTTGAAGGCAAACTTGCAGTGCTTCGGTTCCAAATGCAAATCAAACAAGAACTGGAGTCC
GTGGCTTTGCGGCTTGAAAGTGTTCCAAGCAGTTCTGAATCACCTAGTGATCCCTTTCCCGTGATAATATTCTAGCTGAC
TTAGAGTCTGCCAAGGATGC
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | F | 49.3-49.3 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 7A | 30-30 cM | View Comparative Map | |||
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BNL6.32 | 7B | 30-30 cM | View Comparative Map | |||||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 7A | 63.8-63.8 cM | View Comparative Map | ||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 7A | 63.8-63.8 cM | View Comparative Map | |||
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Wheat composite QTL 2004 | BNL6.32 | 7A | 30-30 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 42.6-42.6 cM | View Comparative Map | |||
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CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 3 | 99.6-99.6 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 3 | 99.6-99.6 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 3 | 55.5-55.5 cM | View Comparative Map | ||||
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JIC IR20/63-83 F2 QTL 1998 | BNL6.32 | 3 | 131.5-131.5 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 3 | 28.1-28.1 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 3 | 11-11 cM | View Comparative Map | ||||
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Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 3 | 56.5-56.5 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 3 | 18.3-18.3 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 3 | 20.6-20.6 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 5 | 38.1-38.1 cM | View Comparative Map | |||
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BNL6.32 | 9 | 44.9-44.9 cM | View Comparative Map | |||||
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BNL6.32 | 9 | 106.7-106.7 cM | View Comparative Map | |||||
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UMC 1998 | BNL6.32 | 3 | 112.2-112.2 cM | View Comparative Map | ||||
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BNL6.32 | 4 | 143.3-143.3 cM | View Comparative Map | |||||
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BNL6.32 | 8 | 76.8-76.8 cM | View Comparative Map | |||||
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BNL6.32 | 9 | 119.3-119.3 cM | View Comparative Map | |||||
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BNL6.32 | 10 | 63-63 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 11,521,955-11,522,393 bp | View Comparative Map | |||
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CDO1395 BROWS Autorad: Survey blot of the probe CDO1395 for the comparative barley/rice/oat/wheat/sugarcane project |